Alosa sapidissima (American shad): 121713173
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Entry
121713173 CDS
T11137
Symbol
smc1al
Name
(RefSeq) structural maintenance of chromosomes 1A, like
KO
K06636
structural maintenance of chromosome 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04110
Cell cycle
asad04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121713173 (smc1al)
04114 Oocyte meiosis
121713173 (smc1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121713173 (smc1al)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121713173 (smc1al)
Meiosis-specific proteins
Cohesin complex and associated proteins
121713173 (smc1al)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
121713173
NCBI-ProteinID:
XP_041953547
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All DBs
Position
7:complement(33456365..33473702)
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AA seq
1228 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFQKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYREDSGEERTFSRIIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARAHVQLQLFKLYHNEAEIEKLNR
ELSHRNKEIDKDRKRMDRVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTAHKIKKLEAARKSLQNAQKMYKKRKADMDELEKEQGAVEMARQEFDERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYISTSRQSLDEQKRMEEELTEEVESAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGARLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIVQSREREMKDLKDRMNVVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQLDYEKNQLKEDQEKVIMWEQ
TVKKDESEIERMKKEEQRHMKIIDETMAQLQDLKNGHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLKSGTMDDISQEEGQAEES
SQRTSSSVLAKEALIEIDYSNLSEDLRDALAEDEIKGEMNTLQQRLNEQQSILQRISAPN
MKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERYDRFNACFESVATNIDEI
YKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAI
HSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADALVGVY
PEQGDCVISKVLTFDLSEYPDANPNPNE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggggtatctgaaattgatagagatcgagaattttaaatcttataaaggcaggcaaatt
attggacctttccagaaatttactgccatcattggacccaatggatcagggaagtccaac
cttatggacgccatcagctttgtgctggcggagaagaccagtaatttgagagtgaagact
ctgaaggacctgatccatggagcccctgtggggaagcctgcggccaatagggcctttgtg
agcatggtgtaccgtgaggacagtggcgaggagcgcacgttcagtcgaatcatcataggg
tcctcctctgagtaccgcatcaacagcaaggtggtgggactgcccgagtacagtgaagag
ctggagaagctgggcatcctcatcaaggctaggaatttcctcgtctttcagggtgcggtg
gagtccattgccatgaagaaccctaaagagcgcacagccctgtttgaggagatttcccgc
tcgggcgagctggctcaggagtatgatcgcagaaagaaggagatggtgaaagcagaggag
gacacgcagttcaactaccaccgcaagaagaacattgctgcagagcgtaaggaggccaag
caggagaaagaggaggccgagcgctaccagcggctgaaggacgaggtggctcgagcccac
gtgcagctgcagctgttcaagctgtaccacaacgaggccgagatcgagaagctgaaccgc
gagctgtcccaccgcaacaaggagatcgacaaggaccgcaagcgaatggaccgcgtggag
gaggagctgaaggacaagaagaaggagctgggcagactgatgagggagcagcagaccatc
gagaaggagatcaaggagaaggactctgagctgaaccagaagcgtccgcagtacatcaag
gccaaggagaacacggcacacaagatcaagaagctggaggcagcgcgcaagtcgctccag
aacgcccagaagatgtacaagaagcgcaaggccgacatggatgagctggagaaggagcag
ggtgccgtggagatggcgaggcaggaattcgacgagcgcatggaggaggaggcgcagagc
cagggccaggacctccagctggaggagaaccaggtgaaagcgtaccaccgtctgaaggaa
gaggccagcaagcgggccgccactctggcccaagagctggagaagttcaatcgcgaccag
aaggccgaccaggaccgactggacttggaggagaggaagaaagtggagacagaggccaag
atcaagcaaaagatcagagagatcgaggagaaccagaagcgtattgagaagttggaggac
tacatctccaccagcaggcaatctctggatgagcagaagcggatggaggaggaactgacg
gaggaggtggagtcggccaagaggaggattgatgagattaacatggagcttaatcaggtt
atggagcagctaggtgacgcccgtattgacaggcaggagaacagcagacagcagcgcaaa
gctgagatcatggagagcatcaagaggctctaccctggctctgtgtatggcaggctgatc
gacctctgccagcccacccagaagaagtaccagattgctgtgaccaaggtcctggggaag
aacatggacgccattattgtggactcggagaagacaggccgtgactgcatccagtatatc
aaagagcagcgaggagagccggagaccttcctgcctctggactacctggaggtgaagccc
actgatgagaagctgcgtgagctgcgcggggcgaggctggtgattgacgtgatccgctac
gagccgccccacattaagaaggccctgcagtacgcctgcgggaacgccctggtgtgtgag
aacgtggaggacgcacgcagaatcgcctttggaggaccatatagacacaagactgtggcc
ctggacggcaccctgttccagaagtctggtgtgatctccggaggtgccagcgacctgaag
gccaaggcccgccgttgggacgagaaggccgtggacaagctgaaggacaggaaggagaaa
ctcaccgaagagctcaaagaacaaatgaaagccaagaggaaggaggctgagctgcgtcag
gtacagtcccaggcccacggtcttcagatgcggctgaagtactcccagagtgacctggaa
caaaccaagacccgccacctgtccctcaacatgcaggaaaagtccaagttggagagtgag
ctggccaactttgggccgcgtatcaacgacatcaagagaatcgtccaatcacgggagagg
gaaatgaaggacctcaaagaccgcatgaatgtggtggaggatgaggtgtttgtggagttc
tgtaaggagatcggggtcagaaacatccgtgagttcgaggaggagaaagtcaagaggcag
aacgagatcgcaaagaaacgcctggagtttgagacccagaagacccgcctgggcatccag
ctggactacgaaaagaaccagctgaaggaggaccaggagaaagtgatcatgtgggaacag
acggtcaagaaggacgagagcgagatcgagcgaatgaagaaggaggagcagaggcacatg
aagatcattgacgagaccatggcccagctccaggacctgaagaacggacacctcaccaag
aagtccgaggtcaatgacaaaaaccatgagatggaggagatccgcaaaaagctgggggga
gccaacaaggagttgacccagctacagaaggaggtcactgccatcgagaccaagctagag
cagaagcgaagcgacaggcacaacctgctgcaggcctgcaagatgcaggacatcaggctg
ccactcaagtcagggaccatggacgacatcagccaggaggagggccaggccgaggagagc
agccagaggacctccagctctgtcctggccaaagaggctctcatcgagatcgactacagc
aacctgtccgaggacctgagggacgctctggctgaggacgagatcaagggggagatgaac
acgctgcagcagcgtctgaacgagcagcagagcatcctgcagaggatcagcgcacccaac
atgaaggccatggagaagctggagagcgtcagggacaagttccaggagaccagcgacgag
tttgaggcggccaggaagagagccaagaaagccaagcaggcttttgagcagattaagaag
gagcgctatgatcgcttcaacgcctgctttgagtccgttgctaccaacattgatgagatc
tacaaggccttgtcccgcaatagcagtgcccaggctttcctgggcccagagaacccagag
gagccctacctggacgggatcaactacaactgtgtggctccgggcaaacgcttcaggccc
atggacaacctctcaggaggagagaagactgtagctgccctggccctgctctttgccatt
cacagttataaacctgctcccttctttgtgctggatgagattgacgcagctctggacaac
accaacattggaaaggtggccaactacatcaaggatcagtctgttcagaacttccaagcc
atcgtcatctcccttaaggaggagttttacaccaaggctgatgcccttgttggagtctac
cccgagcaaggggattgtgtcatcagcaaagtgttaacgtttgacctctcggaatatccg
gacgcgaaccccaatccgaacgagtag
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