Alosa sapidissima (American shad): 121713198
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Entry
121713198 CDS
T11137
Symbol
taf11
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121713198 (taf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121713198 (taf11)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121713198 (taf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
121713198
NCBI-ProteinID:
XP_041953596
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All DBs
Position
7:complement(18059630..18061622)
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AA seq
207 aa
AA seq
DB search
MADPARMKIDSGSASMPKEELQENDVSEKEGPAGSEVSVDSSSQQSQKDDDKAEHSKEAN
AGEDEDEGTSGLHPPASKKLKVDAEKKKEKRQKVDEDEIQKMQVLVSSFSEEQLNRYEMY
RRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFAGEIVEEALDVCDKWGDTPPLQP
KHMREAVRRLKSREQIPNTKHKRILFH
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctgcaagaatgaaaattgattctggatcagcatccatgccaaaggaggaa
ttgcaggaaaacgacgttagtgaaaaagaaggacctgctggaagcgaagtttctgtagat
tccagctcccagcagtcacaaaaagacgacgacaaagcggaacattcgaaggaggcgaat
gctggggaggatgaggatgagggaacgtcaggtctacaccccccagcctctaagaaattg
aaggttgacgcagagaagaagaaggagaagcggcagaaagtagatgaagatgagatccaa
aagatgcaggttttagtctcttcattttctgaggaacagcttaatcgttacgagatgtac
agacggtctgcatttcccaaagctgctattaaaaggcttatccagtccatcacaggaacc
tccgtctcacaaaacgtggtcattgccatgtcgggtatttcaaaagtctttgctggggag
attgtagaagaagcgctggacgtatgtgataagtggggagacacgccgcctctgcagccc
aaacacatgagagaagctgtgaggaggctgaagagccgagagcagatccctaacaccaag
cacaaacgcatcctcttccactga
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integrated database retrieval system
