Alosa sapidissima (American shad): 121713464
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Entry
121713464 CDS
T11137
Symbol
fmodb
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121713464 (fmodb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
asad00535
]
121713464 (fmodb)
Proteoglycans [BR:
asad00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
121713464 (fmodb)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121713464
NCBI-ProteinID:
XP_041954003
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Position
7:complement(15297804..15301615)
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AA seq
356 aa
AA seq
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MQWALLLLLASLAQPCLSYSRNSLYWLSHLRSRHGYGYRNGYPASQWNTENPESDCPLEC
DCPGLYPRAMYCHSRNLQHVPFVPSRMKYVYLHNNQIASIKEGVFDNATDLVWIIMHKNQ
LTSDKIAKKVFSKLKNLQKLYLNSNSLTVIPEDLPTSLVDLRLNNNKITKLSDDTFKDMV
DLSHLNLHGNAIKEVGGAFKGLDSLTVLDLSRNSLEKVPASLPQDLQQLYLNFNQITSVP
ENFLSNYPTLRYVRLSHNLLTDNGIPSSAFNTTSLLELDLSHNRLERIPTISTKLENLYL
QANHIKEFSLGSFCRVVDMANFSQIRVLRLDGNEISTRDVPPEAVLCLRLAVSIDL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggctctgctgcttctcctggcctcgctggcccagccctgcctgtcgtactcc
cgcaactccctctactggctctcccacctgcggagcaggcacggctatggctaccggaac
ggttatccagcgtcacaatggaacaccgaaaatcctgagtccgactgccctctagaatgc
gactgcccgggtctgtacccgagggccatgtactgccacagccgcaacctccagcacgtc
ccctttgtcccctcgcgcatgaagtacgtctacttgcacaacaaccagatcgccagcatc
aaggagggcgtgttcgacaatgccacagatctggtctggatcatcatgcacaagaaccag
ctcacttcagacaagattgccaagaaagtattcagcaaactgaagaacctgcagaagctc
tacctgaacagcaacagcttaacggtcatcccagaggacctccccacctcccttgtggac
ctccggctgaacaacaacaaaatcacgaagctctcggacgacaccttcaaggacatggtg
gacctaagccatttgaatcttcacggcaacgccattaaggaagtgggtggtgctttcaag
ggtctggactccctaaccgtgctggacctgagccgcaacagcctggagaaagtgccggcc
agccttccccaggacctccagcagctttacttgaacttcaaccagatcaccagcgtcccc
gagaacttcctctccaattaccccactctgcggtatgtgaggctctcgcacaacctgctg
accgacaatgggattccgtccagcgccttcaacaccactagtcttttggaactggacctc
tctcacaaccgcctggagaggattcccaccatcagcaccaagctggagaacctctacctg
caggccaaccacatcaaagagttctctctgggcagcttctgcagggtagtggacatggcc
aatttctcccagatcagagtgctcaggctggatggcaatgagattagcaccagggatgtg
cctccagaggcagtgctctgccttcgtctggccgtctccatcgacctctag
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