Alosa sapidissima (American shad): 121713473
Help
Entry
121713473 CDS
T11137
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04020
Calcium signaling pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121713473 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121713473 (grin3ba)
04082 Neuroactive ligand signaling
121713473 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121713473 (grin3ba)
Ion channels [BR:
asad04040
]
Ligand-gated channels
Glutamate (ionotropic)
121713473 (grin3ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
121713473
NCBI-ProteinID:
XP_041954025
LinkDB
All DBs
Position
1:32799483..32833835
Genome browser
AA seq
1187 aa
AA seq
DB search
MNLVFSRFLAYLHIGFQVVLHTFIYPSHLHPQPCHILARIGHTVRLGALLPTRQPSRIQS
ALNRALVHLRQTGNNFLPYNLSLEVLSREPQNGDPESLFRCVCQDIVVQGVSAVLAFPQT
QEELIQVEFMSTFLEIPFISIIEQGEPLRTENRFHVQMLMRVPPSGLAELLVSVLQRGGW
RGSTAVLCPGWEASGVLQTLEQDQEQAEGPDTGVGRGRRWARWHLWEPLDLSGPAGDEGS
RSEEEVLALVEQHLSQAPSPLATSVLLLGSEPQCMSAVLTAAHRLSLAQAPLSATTASAT
HWIMGCPLALDALQSIGSPQGLLAYGEVNRKPLSFYIRDALQLIGQAVTNATLVRPDLAL
IQHMVNCYDKPNKHELPSSGQYLARFLSNTSFSGATGPVEVDRALSRILPAQRFHVWSLQ
RDAVGQPSWVTVAQWQGGQLRVDEQGLWPGGGRRPQESGGGSGVRPRGRWRAGLPVAGSR
VRVVTLVEHPFVFTREVDDEGQCPAGQLCLDPHTNSSDLLNIMFRELAQANSSGGGGGPT
GGVGGSAGGPSLTSDYRKCCYGYCIDLLEKLAEDMNFEFDLYIVGDGKYGARKGGDWTGL
VGDLLNGVADMAVTSFSINSARSRVIDFTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWS
MWVGIFVALHITALFLTLYEWNSPFGMTPHGRNRRRVFSYSSALNLCYAILFGRVVASKT
PKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEEVSGIHDAKLHHPSLGFRFGT
VRESSAEDYMKKSFPEMHEYMRRFNMPTTPDGVATLKTDPPQLDAFIMDKALLDYEVSID
ADCKLLTVGKPFAIEGYGIGLPQNSPLTRNVSEYVSRYKSDGYMDMLHDKWYKVVPCGKR
VFAVTETLQMGIQHFSGLFVLLCVGVAGALLTLAGEHTFYRLVLPHLRQHQRFKYWLHTS
QKIHRALNMACEEEGRHQATPDRSPTLCLSESCNIHRLQPPSPCPEPSSTATSASSTTTT
MAWNNQSARASRESGKDHSKRVHFNLETLNTYRLQAPPAGPERGLRRGLVGSPPTQLCEN
GGPATLSLVLSPPSCSSSSLAGSTSSQWEGELQELQGRIEEFRGQLRAALARRAELQNSL
EREKASCRVRAVVESATADRPLPAAATTISTTATTGPVRDKDTNLRR
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagtgttctcacgattcttggcataccttcacatcgggttccaagtcgttctc
catacgtttatctaccccagtcatctccatccgcaaccctgccacatcctggcacgcata
ggacacaccgtgcgcttgggcgcgcttttgccgactcgtcagccgtccaggatacagtct
gccctgaaccgcgccctcgtccacctccggcaaactggaaacaactttttaccctataac
ctgagcttggaggtcttgtctcgggagcctcaaaacggagaccccgaatcccttttcaga
tgtgtctgccaggacatagtcgtgcagggagtctctgccgttctcgcttttccccagacc
caggaagagctcatacaagtggagtttatgtccacatttttggaaataccattcatcagt
attattgaacaaggagagccactaagaactgagaaccggttccacgtgcagatgctgatg
cgggtgcctccgtcggggctggcagagctgctggtgtccgtgctgcagcgggggggttgg
cgtgggagcacagccgtgctgtgtccaggctgggaggccagcggcgtgctacagacgctg
gagcaggaccaggagcaggccgagggcccggacacgggagtgggccgagggaggcggtgg
gcacgctggcacctgtgggagccccttgacctgtcaggccccgcgggtgacgaggggtcg
cggagcgaggaggaggtgctggcgctggtggagcagcacctgagccaggcgccatcacca
ctggccacctccgtgctgctgttgggctccgagccgcagtgcatgtccgccgtgttgacc
gccgcacaccgactcagccttgcccaggcccccctctccgcaacgaccgcgtccgccacg
cactggatcatgggatgccctctggccctggacgcgctgcagtccatcggctctccccag
ggcctgctggcgtacggcgaggtcaaccgcaagcccctcagcttctacatccgcgacgcg
ctgcagctcatcggccaggcggtgaccaacgccactctggtgcggcctgacctggcgctc
atccagcacatggtcaactgctacgacaagcccaacaagcacgagctgccctcatctggc
cagtacctcgccaggttcctgtccaacacgtcgttcagcggcgccacgggccccgtggag
gtggaccgggccctgtcccgcatactgcccgcccagcggttccatgtgtggagcctgcag
cgcgacgccgtgggccagccctcctgggttacggtggcgcagtggcagggcgggcagctg
cgggtggacgagcagggcctgtggccgggtggcggcaggaggccgcaggagagcggcggg
gggtccggcgtccggcccaggggcaggtggagggcaggcctgccggtggccgggagccgc
gtgcgggtggtgacgctggtcgagcacccttttgtgttcacgcgggaggtggacgacgag
ggacagtgccccgccggacagctgtgcctggacccccacaccaacagctcggacctgctc
aacatcatgttccgcgagctggcccaggccaacagcagcggcggcggtggtgggcccact
ggaggtgtcggcggtagcgctggtggaccctccctgacctccgactaccgcaagtgctgc
tacggctactgcatcgacttgctagagaagcttgccgaggacatgaacttcgagttcgac
ctctacatcgtgggcgacggcaagtatggcgccaggaagggcggcgactggacgggcctg
gtgggcgacctcctgaacggcgtggccgacatggccgtcacctccttcagcatcaactcg
gcgcgcagccgtgtcatcgacttcaccagccccttcttctccaccagcctgggcatcctg
gtgcgcagcaaggacacggccgcacccatcggcgccttcatgtggccactgcactggtcc
atgtgggtgggcatcttcgtggcgctgcacatcaccgcactcttcctcacgctctacgag
tggaacagccccttcggcatgacgccgcatgggcgaaaccgccgccgggtcttctcctac
tcgtcggcgctcaacctgtgctacgccatcctgttcggccgcgtcgtggccagcaagacg
cccaagtgctggacaggacgcttcctcatgaacctgtgggccatcttctgcctgctggtg
ctgtccagctacacggccaacctggccgccgtcatggtcggcgagaagaccttcgaggaa
gtctccgggattcacgacgcaaagctccatcacccgtctctggggttccgcttcgggacg
gtacgggagagcagcgcggaggactacatgaagaagagcttccccgagatgcacgagtac
atgcggcgtttcaatatgcccaccacgcccgacggagtggctacactcaagacagatcct
cctcagctggatgccttcatcatggacaaggctcttctggattacgaagtgtccatcgac
gccgactgcaaactgctcacggtgggcaagccattcgctattgaaggctacgggattggc
ctgccccagaactctcctctgacccgcaatgtctccgagtatgtcagccgctacaagtct
gacggctacatggacatgctgcacgacaagtggtacaaagtagtcccatgtgggaagagg
gtcttcgctgtgacagagacgctgcagatgggtatccagcacttctcggggctgtttgtg
ctgctgtgtgtgggggtggcgggggccctgctcactctggccggggagcacaccttctac
cggctcgtcctgccgcacctccgacagcaccagcgcttcaagtactggctgcacaccagt
cagaagatccaccgtgctttgaatatggcctgtgaggaggaggggagacatcaggccact
ccagacagaagtccgaccttatgtctgtcagaaagctgcaacatccaccggctgcagccc
ccatctccctgcccagagccctcctccacggccacctcggccagcagcaccaccaccacc
atggcctggaacaaccagagtgctcgggcgtcccgcgagtccggcaaggaccacagcaag
cgggtccacttcaacctggagaccctcaacacgtaccggctgcaggctccgccggcgggt
ccagagcgcggtctccggcgcgggctggtgggcagcccccccacgcagctgtgcgagaac
ggcggtccggccacgctgagcctggtgctgtccccgccgtcctgctcctcctcttcgtta
gcggggtccacctcctcgcagtgggagggcgagctgcaggagctccaggggcggatcgag
gagttccgcgggcagctgcgggcggccctggcgcggagggccgagctgcagaacagcctg
gagcgggagaaggcgtcgtgcagggtgcgcgccgtcgtggagtccgccaccgccgatcgg
ccgctcccggcagctgccaccaccatctccaccacggccaccactggcccagtcagagac
aaggacaccaacctgaggaggtga
DBGET
integrated database retrieval system
