Alosa sapidissima (American shad): 121713475
Help
Entry
121713475 CDS
T11137
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04510
Focal adhesion
asad04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121713475 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121713475 (lamb2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
ATG16
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
121713475
NCBI-ProteinID:
XP_041954023
LinkDB
All DBs
Position
7:complement(10095894..10150541)
Genome browser
AA seq
1854 aa
AA seq
DB search
MSSCFPAQMPAMARFACVIFLALSATAQDLPSSPHGCTEGSCYPATGNLLIGRAINLTAT
STCGLQGPEPYCIVSHLQESDKCFACDSRSPYDPYYRNSHRVENVISLQDQNGELTWWQA
VNGEENVSIRLNLEAEFHFTHLIMKFKTFRPAAMLIERSADFGRSWRPYRYFSYNCTRTF
PGVPTHALQLIDDVICEERYSDIEPSTEGEVIYKVLDPSIHVKDPYSLEIQEMLRITNLR
INFTKLHTLGDDMLDRRADVLQKYYYSLYELVVRGSCFCYGHASECAPVPGVDIRENGMI
HGRCVCKHNTEGLNCERCRDFHNDLPWRPAESNNPHTCRECNCNGHSSECHFDMAVYLAT
GNISGGVCDNCLHNTMGRTCEMCKPFYYKDPSRDIRDPAACVACDCDPVGSVDGGVCDSH
TDPELGMIAGQCRCRENVRGPRCDFCKEAHYGLSQNNPKGCQPCNCDPRGTTMLGTPCDQ
ISGDCSCKRYVTGRNCDQCLPEFWGLSNDMAGCRACGCDFGGAYNNKCMRDNGQCDCRPH
LIGRQCDDVQPGYFCAALDFYKYEAESAVGHSPDDPALPGRPRPQAETDCVEQLNNQLRR
NRRHRRIATAQQQRRLHSEASATAQRKIRQIRQLQQTPDVKVVHRERLDLGPGFARVKDG
AGLVFTIDNIPYAMEYDILIRYVAESTEDWEVIVSLTSTHLAMSPRCGNLLPTEQMYTVT
LPHSGRHVMMPRPFCFEPENRYTMSIRFQRHGVTHRYLTAFILVDSLVLIPKYTELPGFS
GSDALAEHRRDEMRRYICVDSFLAPRFPRPPLAEMCTKLICSISAIMHDGALPCHCDPQG
SLNSECDRIGGQCHCKPNVIGRRCDQCAPGTYGFGPYGCTACNCHSEGSLELQCDPHTGQ
CPCRPGAMGRQCSDCQPGQWGFPSCRPCQCNGHADSCDSYTGACHQCRDYTDGYQCERCM
NGFYGNPVLGSGEHCRPCPCPGNPGSDHSNGDSCYADHGSNQIICNCKQGFTGSRCDQCA
PGYYGDPERPGGECRPCQCNGNTDPQDPEACDPRTGRCLKCLYNTDGYACAECKHGFYGN
ALVQDCRRCTCVTAGTRPEYCTDGLCHCDRQTGACPCRNNIEGHNCDQCAPNHWNFGLEW
GCEPCGCHPQHAMSAHCNMFTGQCHCQPGFGGKQCTECEQLHWGDPRVECRECNCEPLGS
ESAQCDQVTGACECQEGKSGRQCDECARGYTGAFPKCVPCHPCFQLWDDVVCQLRRDLDY
IQSKVDMILETGMVPGVSDARIQDLERKLNQVRDLIKNGESDRIYHLIAQSIDDLRAEIA
MTDGRLMATTRDLDQVEEQDRHLKRNLTSLEQELTDLNATLASHRKQLENYFSAGFADQF
EKVKRYYQESQEAERRCNASVSGAQSPVEQSRRTRKETEDLLDKSRDRLLRTVAAHKKSL
SELETKAHEVDRSVHHLSHKVCGGHSNASANGSCPDSPCGGAGCRDEKNQRVCGGPGCNG
TMSAATGALALAKDASGNLTAISDELQSMSKKLHDVLLMTQDVKTQAMTTLDKAREKKDA
FEKNNKDLKNFIQTVRDFLTEEGADPESIEKVALQVLAISLPVNQTAMDNLVNQIKDSIS
NLTDVEGVFNQTSEELEKAKDLLDRARDVKARAEGVKDAANETKNALDASKKAIEKAKNA
TEVAMNNLNSTREATTMVENNLTDLERKQMDAMMRLARLSEDIEALRNKTELNREMAEEA
KAHANNATEAADALKEDLTKAEELYDTLTKKVDSLGGSATGNINQRAKDMKKEAEDLLKK
ATTDLEKLKNLEKKFKRNERRMQDQRNQLSELEQNVTRVREHIRERAQGYSTCT
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctgttttcctgcgcagatgccagccatggccagattcgcctgcgtcatcttt
ctggctctgtcagcgacggctcaggatctcccctccagtcctcacggctgcaccgaggga
agctgctacccggcaacggggaacctgctgattggccgagccatcaacctaactgccacc
tccacctgcggtctgcaaggccctgagccatactgcatagtgagccacctgcaggagtcg
gataagtgcttcgcctgtgactcccgaagcccctacgacccctactatagaaacagccac
agggtggagaacgtaatctccctccaggaccagaacggagagctcacatggtggcaggct
gtcaatggagaagaaaatgtcagcattagactcaacctagaagccgagttccacttcact
cacctcatcatgaaatttaagacctttagaccggcggccatgttgatcgaacgctcggct
gatttcggacgctcctggagaccctaccgctacttctcgtacaactgcaccagaaccttc
cctggagtccccacgcacgccctgcagctcatcgacgacgtcatctgtgaggagcgctac
tcggacatagagccgtccactgaaggagaggttatctataaagtgctcgacccttccatt
cacgtcaaggacccatacagtctggaaatccaagaaatgcttcgcatcactaacctgcgc
atcaacttcaccaagctgcacacactgggggacgacatgctggaccggcgggcggacgtg
ctgcagaagtactactactctctgtacgagctggtggtccgaggcagttgcttctgctat
gggcacgcatctgagtgcgcccctgtgccaggagtggacatcagagagaatggcatgatc
catgggcgctgtgtgtgcaaacacaacacagaggggctgaactgtgagcgctgcagagac
ttccacaatgacctgccctggagaccagccgagtccaacaacccacacacctgcagggaa
tgcaactgtaatggccactcatccgagtgccactttgacatggcagtgtatctggccacc
gggaacatcagtggtggtgtctgtgacaactgcctccacaacaccatgggccgcacctgt
gagatgtgcaaacccttctactacaaggacccttctagagacatccgcgacccggctgcc
tgtgtcgcgtgtgactgtgacccggtgggctcagtggacggcggtgtgtgtgacagccac
actgaccccgagctgggcatgatcgctggacagtgccgctgcagggagaacgtcaggggc
ccccgctgtgacttctgcaaggaggcccactacggcctgagccagaacaaccccaagggc
tgccagccctgcaattgtgatcctcgtggaaccaccatgctgggaacgccttgtgaccag
atcagtggagactgctcatgcaagcgatatgtcaccgggcgcaactgcgaccagtgcctg
ccagagttctggggcctcagtaatgacatggccggctgcagagcctgtggttgtgacttc
ggtggggcctacaacaacaagtgcatgagggataatggtcagtgcgactgtcgccctcac
ctgattggccgtcagtgtgatgacgtgcagcccggttacttctgtgccgctttggacttc
tacaagtatgaggccgagtctgcagtcggacactcgcccgatgaccctgcactgcctgga
aggcctcggccccaagctgagacggactgtgtggagcagctgaacaaccagttgaggagg
aaccgacgccaccgacgcatcgctacggcccagcaacagaggcgactgcactccgaggcg
agtgccaccgcgcagaggaaaatacgccagatccgccagctccaacagacgccggacgtg
aaggtcgtgcacagggagaggttggacctggggcctggttttgctcgggtcaaagatggc
gcaggcctggtcttcactatcgacaatattccctatgcgatggagtacgacatcctgatc
cgctacgtggctgagtctactgaggactgggaggtcattgtgagcttgacttccacacac
ctggctatgagtccccgctgtggcaacctgctgccgacggagcagatgtacacagtcacc
ctcccccacagtggcaggcacgtcatgatgccgcgtcccttttgcttcgagcctgagaac
cgctacaccatgtccatccgcttccagcgtcacggggtcacccaccgctacctcaccgcc
ttcatcctggtcgactcgctggtgctgatccccaagtatacggagctcccagggttcagt
gggagcgacgcgcttgcggagcaccggcgtgatgagatgcggcgctacatctgcgtggac
tccttcctggccccccgcttcccgcggcccccgctggcggagatgtgtaccaagctcatt
tgcagcatctctgccatcatgcatgacggcgccctgccctgtcactgtgaccctcaggga
tcactgaacagtgagtgtgaccgaatcggaggtcaatgtcactgcaagcccaacgtgatt
ggccggcgctgtgaccagtgtgctccagggacttatggattcggaccatatggctgcact
gcgtgtaactgccactctgagggctcgctggagttgcagtgcgacccccacacggggcag
tgcccgtgcaggccgggggcaatggggcgccagtgctccgactgccagcccggccagtgg
ggcttccccagctgcaggccctgccagtgtaacgggcacgcggactcgtgcgactcctac
acgggcgcctgccaccagtgcagagactacacagacggctaccagtgtgagagatgtatg
aacggtttctatggcaaccctgtattggggtcaggagagcactgtcgtccatgtccgtgt
cctggcaaccctggcagtgaccactccaacggagactcctgctatgctgaccatggctcc
aaccagatcatctgcaactgcaagcaaggctttacaggctcgcgctgcgaccaatgcgca
cccggttactacggtgaccccgagcggccgggaggcgagtgccgtccatgccagtgcaat
ggcaacaccgacccccaggacccagaggcgtgcgacccccgcaccggccggtgcctcaag
tgcctgtacaacaccgacggctacgcctgtgccgagtgcaagcatggtttctacggcaac
gccctggtgcaggactgcaggcgctgcacctgtgtgacggctggcacgcgtcctgagtac
tgcaccgacggtctgtgccactgtgaccgtcagacaggggcctgcccatgccggaacaac
atcgaggggcacaactgcgaccagtgcgcccccaaccactggaactttggcctggagtgg
ggctgtgagccctgtgggtgtcacccgcagcatgccatgagtgcccactgcaacatgttt
actggccagtgccactgtcagcccggctttggagggaaacaatgcacagaatgtgagcag
cttcactggggagatccacgcgtggagtgtagagaatgcaactgcgaaccactgggctcc
gagtcggctcagtgtgaccaggtgacgggtgcgtgcgagtgccaagaggggaagtccggg
cgtcagtgtgacgagtgcgcccgtgggtacaccggcgcgttccccaagtgcgtgccctgc
cacccctgcttccagctgtgggacgacgtcgtgtgccagctccgccgcgacctcgattac
atccaaagcaaggtggacatgatcctggagacgggcatggtgcctggcgtgagcgacgct
cgcatccaggacctggagaggaagctgaaccaggtgcgggacctgatcaagaacggagag
agtgaccggatttaccacctcatcgcacagtccattgatgacctgagggcagagatagcg
atgacagatggacgtctgatggccaccaccagggacctggatcaagtggaggagcaggac
aggcacctgaaacggaacctgaccagtctggagcaggagctgaccgacctgaatgccacc
cttgccagccatcgcaagcagctggagaactacttcagcgccgggttcgcagatcagttt
gagaaagtgaagcgctactaccaggagtcccaggaggcggagcggcggtgcaacgcatcc
gtgtcgggcgcccagagccctgttgagcagtcccgccgcacacgcaaggagacggaggac
ctgctggacaagagtcgagaccgcctcttgcgcacggtcgctgcccacaagaagtccctg
tccgagctggagaccaaagcgcacgaggtggacagaagcgtccaccacctcagccacaag
gtgtgtggtggccatagcaacgccagtgccaacggaagctgtccagacagtccgtgtggg
ggtgccggttgccgcgacgagaagaatcagcgtgtgtgtggcggaccgggctgcaacggc
accatgagcgcggccaccggggcgctcgcgctggccaaagacgccagcggcaacctgacg
gccatcagtgatgaactacagagcatgtccaagaagctccatgatgttttactgatgaca
caagacgtgaagacccaagccatgactacactagataaagccagggagaagaaggacgcc
tttgagaaaaacaacaaggacctcaagaatttcattcagacagtcagagactttttaact
gaggaaggagccgacccagagagcattgagaaggtggccctccaggtgctggccatctcc
ttgccggtgaaccagaccgccatggacaacctggtcaaccagatcaaagacagcatcagt
aatttgacagacgtggagggcgtgttcaaccagacctctgaggagcttgaaaaggcaaag
gacctgcttgacagagcacgggatgtcaaggctcgggctgagggtgtcaaagatgcagct
aatgagaccaaaaatgccctggatgcatctaagaaggccatagaaaaagcaaagaatgct
accgaggtcgccatgaacaacctgaacagcaccagagaagccactaccatggtggagaat
aacctcactgatctggagcgaaagcagatggacgccatgatgcggctggccaggctctcg
gaggatatcgaggccctgaggaacaagacggagctgaacagggagatggccgaggaggcc
aaggctcatgcaaacaatgccacggaggcagccgatgcactgaaggaggatctgactaag
gccgaggagctctatgacacgctgaccaagaaggtagactccctgggcggcagtgcgact
gggaacatcaaccagcgggccaaagacatgaagaaagaggctgaggacctgctgaagaaa
gccactaccgacctggagaagctaaagaatctcgagaagaagttcaagaggaacgagcgg
cggatgcaggaccagcggaaccagctgtcggagctggagcagaacgtgaccagagtgagg
gagcacatccgagaacgggcgcagggatacagcacgtgcacttaa
DBGET
integrated database retrieval system