Alosa sapidissima (American shad): 121713517
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Entry
121713517 CDS
T11137
Symbol
zmp:0000000926
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121713517 (zmp:0000000926)
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Gene cluster
GFIT
Motif
Pfam:
AXH
New_glue
Motif
Other DBs
NCBI-GeneID:
121713517
NCBI-ProteinID:
XP_041954106
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Position
7:complement(29576402..29605454)
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AA seq
699 aa
AA seq
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MNPTPDRGKECLPPKKRESRQGSSEQQRPPEDDFKPPAPLRPRALAGRQSEARESSDAPH
YDKDLPPPPPPPAPLQPLPLQWHVSYPPPASHPFLSPGDRHSAISPSWRDSRVLDVVDPP
IPHHSRWPPLTLQPPLSLPSYKSHYASDRDAWPYFSRREYSPSSFFSPAHHLFTQPAPPY
PTESLSERLRYPSRRPNGLDGLEGRQSSLERAPSAGEGGNDSRSRHAEGFHTNGRKRHPE
DTAGSSQARGTLSSREGPNARTPPQDRERDRDRQRERERERERERERERDRERERERDRE
RDLRRTPKAPHLAESRTAKVEPLGLGAIQGAGAQIYYALGSVYPSLQQQTPSFAYPAPLS
SAGTPPYTPPHSKRNSQLSPLGSHQHNSHGTAQGPEHECNEELASPPSPYRERAVHGTHG
GPVGAEPHLHPNAGAAVLPHFAKGSLIELAGGRLKRVEELRTDDFLRSADISPEFHLSSC
TVLHILPGPTHAFSQLQVLLADRNTQELLTVLVEYPFFVRDRGWSSCCPQRTGQLYGLAC
RQLNAGDVCLALTPTPAPLPGSTLGPPPPRSRSGSRAARTHHHGQALGSAAPTANSSSSP
GAERMPPPPPPPPLPLPPPPTPPSTTTTTTTSTNTTGSASHSVERGREERETRPRKRRWS
APDLPPNFIREGEQQEEEGEDRRRTPPDLPQGSKQEKQQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaccccagaccgcggcaaagagtgcctccccccgaagaagcgggagtcccgg
cagggctcctcagagcagcagcgccccccggaggacgacttcaagcccccggcaccgctg
cggccccgagccctggcagggaggcagtccgaggccagggagagtagcgatgcccctcac
tatgacaaagatctgccccctccgccaccaccaccggccccactgcaacccctgcccctc
cagtggcacgtgtcctacccgcccccggcgtctcacccgttcctctcccccggtgacagg
cacagcgccatctctccctcctggagggacagccgggtcctggacgtagtggaccccccc
atcccgcaccactcacgctggcccccgctgaccctgcagccgccgctgtccttaccctct
tacaagagccactatgcctcggaccgggacgcgtggccctacttcagtcgccgggaatac
agcccttcctccttcttctccccagcgcaccacctcttcacccagcctgcgccgccctac
cccaccgagagcctctccgagcggctccgctacccgagcagaaggcccaacggtttggac
ggcctggagggtcggcaaagttcccttgagagggcaccctctgctggggagggtggcaac
gacagccgctccaggcacgcggagggctttcacaccaatgggaggaagcgacacccggag
gacactgcgggatcatcgcaggcgagaggaacactgtcctcacgggagggccccaacgcg
cgcacccccccgcaggaccgagaacgagatcgagacagacagagagaaagggagagagaa
cgagagcgtgagagagagcgagaaagagacagagaaagagagagggagagggacagagag
cgagatctccgcaggactcccaaagcccctcacctcgccgaatcacgaaccgccaaggtg
gagcccctgggtctgggtgccatccagggggccggggctcagatctactacgcgctgggc
tccgtctacccttccctccagcagcagacgccctcgttcgcctacccggctcccctcagc
tcagcgggcacgccgccatacacgcccccacacagcaagaggaactctcagctctcccct
ctgggctcgcatcagcacaacagccacggcacggcccaggggcctgaacacgagtgcaac
gaggagctggcctcgcccccgagtccataccgcgagcgtgccgttcacggcacccatggg
ggccccgtcggcgccgagccgcacctccaccccaacgccggcgccgccgtcctacctcat
ttcgccaaggggtccctgatcgagctagccggggggcggctgaaacgcgtggaggagctg
cgcaccgatgacttcctgcgcagcgccgacatctcgcccgagttccacctgagcagctgc
accgtgctgcacatcctgcctggccccacgcacgccttcagccaactgcaggtcctgctg
gccgaccgcaacactcaggagttactcacagtcttagtggagtatccattctttgtgcgc
gatcgaggctggtcttcgtgctgcccgcagagaaccggccagctctacggtctcgcctgc
cgccagctgaatgccggggacgtgtgcctggcgctgaccccgacccccgcacccctccct
ggctccaccctgggccccccgccaccccgctcccgctcaggctccagggccgcccgcacg
caccaccacggccaggccttgggcagcgcggcgccaacggccaattccagctccagccca
ggagcagagaggatgccccctccacctcctcctccgcctcttcctcttcctcctccccct
acgcctccctccaccaccaccaccaccaccacctccaccaacaccaccggcagcgcctcc
cacagcgttgagaggggccgtgaggagcgagagacacggcctcgcaagagacgctggtca
gcccccgacctccctccgaatttcatccgagagggggagcagcaggaggaggaaggagag
gacaggaggaggacacccccagatttacctcaaggctccaaacaggagaaacaacaatag
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