Alosa sapidissima (American shad): 121713733
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Entry
121713733 CDS
T11137
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121713733 (tfip11)
Spliceosome [BR:
asad03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121713733 (tfip11)
Other components
Complex C specific factors
121713733 (tfip11)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
121713733
NCBI-ProteinID:
XP_041954548
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Position
7:complement(633191..656827)
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AA seq
842 aa
AA seq
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MHHGKVHERTRIMSMSHLYGRREEEEDGVEIEKFEISEWDLANEFNPERRRHKQTKEEAT
YGIWAEHDSDEERPSFGGKRSKDYSAPVSFVSAGIRKTAAEEKQEQGSDESDADGEAPPA
PPPSRAAAPKKLQTGSNFKSSQRGFAGNIRPGQDLGTWEKHTRGIGQKLLQKMGYVAGQG
LGKNAQGIVNPIEAKVRKGKGAVGAYGRERTQQSLQDFPVVDSEEEEEKEFQKELGQWRR
EPGVGKKKPKYSYRTVEELKAHGKVSDRGMVTPAGELAKVKVIDMTGREQRVYYSYSQMS
QKHSVPEEPTLSEAVREQKPSGFALPELEHNLKLLIELTEQEILQSARQLQHERDTVVSL
SHESSVLQERLSEEDAALRRLEEVLELVERFEAGEGHGDQPITLQECAEVFEKLQTGFYQ
EYKTLGLSDLAVSVLHPLLKGKLSSWNPLKDCSYGLEEVGQWRAILESGQMHHGAPDASN
MDPYHRLLWEVWLPVMRTAVTQWQPRNVGPMVDCIECWAPILPLWILDHVLEQLIFPRLQ
REVESWNPLTDTVPIHAWLHPWLPLLQGRLEPLYPPIRSKLANALQRWHPSDGSARLILQ
PWKDVFTPGAWEAFMVKNIVPKLELCLSELVVNPHQQHMDPFHWVMDWEGMLSPSCMVGL
LDKNFFRKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDTLLAQPLVKDKFNEALDIMNR
AVSSGIGDYMQPGARENIAYLTHTERRRDFQYRAAQERQEAESAAQRGIGAMAVPTNFKD
LVQAKAVENGIVFLPLVGRRHEGKQLYTLGRITVYIDRGVVFVQGERTWVPTSLQSIIDM
AK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatggaaaagtgcatgaacgaaccaggatcatgtcgatgtcccacctgtatggg
cgtagagaggaggaggaggatggggtggaaattgagaagtttgagatctcggagtgggac
ctggccaacgagttcaaccctgagcgccggcgccacaagcagaccaaagaggaagcgact
tatggcatctgggctgagcacgactctgatgaggagcggccaagtttcggcgggaaaaga
agcaaggattactcggcacctgtgagctttgtgagtgctgggattcgtaagactgcagca
gaagagaagcaggaacagggctcagatgaatcagacgccgacggagaagctcccccagct
cccccaccttctcgtgctgccgcacccaagaaattacaaactggtagcaacttcaagagt
tcccagagggggtttgctgggaacatcaggcccggccaggacttgggcacgtgggagaag
cacactcgaggaatcggacagaagctcctgcagaagatgggttacgtagcaggccagggc
ctggggaagaacgcccagggtattgtgaacccaattgaggccaaggtcagaaaaggcaaa
ggagccgtgggggcctatggccgggagcggacccagcagtccctgcaagacttccccgtg
gtagattctgaagaagaggaggagaaggagttccagaaggagctcgggcagtggcgtcga
gagccaggcgtggggaagaagaagccaaagtactcctacagaaccgtggaggagctgaag
gctcatgggaaggtgtcggacaggggcatggtcactccagctggagagctggccaaggtc
aaggtgatcgatatgactggcagggagcagagggtctactacagctacagtcagatgagc
cagaagcacagcgtgcctgaggaacccacgctgagtgaagccgtacgggagcagaagccc
tcgggcttcgccctgccagaactcgagcacaacctcaagctgctcatcgagctaactgaa
caggagatcctacagagtgcgcgtcagctgcagcacgagcgtgacacggtggtgtctctg
tcccatgagagcagcgtgctgcaggagcggctgagtgaggaggacgcggctctgaggcgg
ctggaggaggtgctggagctggtggagcgcttcgaggccggggaaggccacggtgaccag
cctatcacgctgcaggagtgcgccgaggtctttgagaagctgcagactggtttctaccag
gagtacaagaccctggggctgtccgacctggcagtgtcagtgctccaccccttactgaag
gggaagcttagcagttggaatcctttaaaggactgctcttacggactggaggaggtgggc
cagtggagagccatactagagtcgggccagatgcatcatggcgcacctgacgcctccaat
atggacccctaccacaggttgctatgggaggtgtggctccctgtgatgaggaccgcggtg
acccagtggcagcccaggaacgtggggcccatggtggactgcatagagtgctgggccccc
attctgccgctctggatcctcgatcatgtcttggagcagctcatattccccaggctacaa
agagaggtggagagctggaacccgctgaccgacacagtgcccatccacgcctggctgcac
ccatggctgcctctcctgcagggccgcctggagccgctgtacccgcctatccgcagcaag
ctggccaacgccctgcagcgctggcaccccagcgacggctctgcccgcctcatcctgcag
ccctggaaggacgtgttcacgcctggcgcctgggaggccttcatggtcaagaacattgta
cccaagctagaactgtgtctgtccgagttggtggtcaacccgcaccagcagcacatggac
ccgtttcactgggtgatggactgggagggtatgctctcgccctcttgcatggtcggcttg
ctcgacaagaacttcttccgcaaatggctgcaggtgctgtgctcttggctcagtaacagt
cctaactatgaggagatcaccaagtggtatctgggctggaagtccatgttctcagataca
ctgctggctcagccgctggtgaaggacaagttcaacgaggccctggacatcatgaacaga
gccgtgtcctccggcataggtgactacatgcagccaggtgcgcgtgagaatatcgcttac
ctcacacacacggagcgtcggagggacttccagtaccgtgctgcccaggagcggcaggag
gcggagagcgcggcccagaggggcatcggtgccatggccgtgcccaccaacttcaaggac
ctggtgcaggccaaggccgtggagaacggcatcgtcttcctgcccctggtgggccggcgg
cacgagggcaagcagctgtacacgctcggccgcatcacggtctacatcgaccgcggcgtg
gtgttcgtgcagggcgagaggacctgggtgcccacctccctccagagcatcatcgacatg
gccaagtag
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