Alosa sapidissima (American shad): 121713897
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Entry
121713897 CDS
T11137
Symbol
clcn2a
Name
(RefSeq) chloride channel protein 2a isoform X1
KO
K05011
chloride channel 2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121713897 (clcn2a)
Ion channels [BR:
asad04040
]
Chloride channels
Chloride channel (CLC)
121713897 (clcn2a)
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GFIT
Other DBs
NCBI-GeneID:
121713897
NCBI-ProteinID:
XP_041954874
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Position
1:complement(30432600..30557189)
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AA seq
1007 aa
AA seq
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MKIPVELDSEVFPLEMFPVAVLLRAGRCNQAMMYGRYTQELGAYAKEEAARLREDSGLRR
SASVRGQTPEPLEDEKDACTKCHDCATRCRKFLISRVGEDWIFLILLGLLMALVSWAMDY
TIAFCQQAQKWMYGGLDRNMLLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTI
LRGVVLKEYLTFKTFVAKVIGLTCALGSGMPLGKEGPFVHVASLCAALLSKFMALFGGIY
MLKEEPFVGTKNELRNTEMLSAACAVGVGCCFAAPIGGVLFSIEVTSTFFAVRNYWRGFF
AATFSAFIFRVLAVWNQDEETITALFKTRFRLDFPFDLQELPAFAVLGIASGFGGALFVY
LNRIIVESMRKQKTINKFLLKKRLVYPALVTLLVSTLTFPPGFGQFMAGQLTQHESLVAL
FDNRTWYKQGVAEEFDFQPEAWKHPQLNVFVTLLLFVVMKFWMSAVATTMPVPCGAFMPV
FLIGAAFGRLVGESMAAVFPDGITADGTVYPIVPGGYAVVGAAALSGAVTHTVSTAVIVF
ELTGQISHILPVMIAVILANAVAQSLQPSLYDSIIRIQKLPYLPELGWGQEKYNIRVEDI
MLQDVRHITLTSTYRHVQDAVSTAQLKTLALVESNESMILLGSIERSQLQSLLSLQLGRT
RRLEFLRERAQDNGAHLPMLIGQDSPPKGSRGVRFLVSSAGISTEESSYSPTVSNSQIPL
KSALKTVSAVGNTDTPNSSQTLSCEDPEQELVESKARAVARKSRRPRRVRTPLAAPDVED
DMTTAEIAEWEERQLDEPVDFKNCKIDPAPFQLVERTSLHKTHTIFSLLGLDHAYVTSTG
RLVGVVSLRELRKAIEGSVTVTGVKVRPPLASFRDSGTSTSVAEVTELHKLWNRHRSLSL
PREPSPPELEDQSDLALDGSPVFSRDCTELSTQNTTLQSDDQSEVVCESASPSHSPETLP
ELPCDYDSTHLDVDQSGAEEELCPSPSEEPPEEVCEAAEADTKDLVE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccctgtggaactagattctgaagtgtttcccctagaaatgtttccggtagca
gtgctgttacgtgccggaagatgtaatcaagccatgatgtatgggagatatacccaggag
ctgggcgcctatgctaaagaggaggcggctcgcctgcgggaggactcgggtctgcgtcgc
tcggccagcgtgcgtggacagaccccggagccgctcgaggacgagaaggacgcatgcacc
aagtgccatgactgcgccacacgctgcaggaagttcctgatctcgcgggtgggggaggac
tggatcttcctcatcctgctcggcctgctgatggcgctggtgagctgggccatggactac
accatcgccttctgccagcaagctcagaagtggatgtacgggggactggatagaaacatg
ctgctccagtacctggcctgggtgacctaccccgtggtcctcatcaccttctcggcaggc
ttcacgcagatcctggccccgcaggcagtgggttcagggatccccgagatgaagactatc
ctgagaggcgtagtactgaaggaatacttgacctttaaaacctttgtggccaaagtcatc
ggcctcacatgtgccctgggcagtggcatgcccctggggaaggagggaccatttgttcat
gttgccagcctgtgtgctgctctcctgagcaagttcatggccttgtttggagggatctat
atgctgaaggaagagccctttgtgggaaccaagaacgaactgaggaacacggagatgctg
tctgcagcctgtgctgtcggtgtgggctgctgtttcgctgccccgataggaggtgtgctc
ttcagcattgaggtgacgtccaccttctttgcggtgaggaattactggagaggcttcttt
gccgcaaccttcagtgccttcatcttccgagtgctggccgtgtggaaccaagatgaggag
acaatcactgctctctttaaaacgcgtttccgcctcgacttcccctttgacctccaggag
cttccagcatttgctgtccttgggattgccagtggctttgggggtgctctgtttgtttac
ctaaaccgaataattgttgaatccatgaggaagcagaaaacaatcaacaagtttttactg
aagaagcggctggtgtaccctgctctcgtcaccctgctggtgtccaccctcacttttcct
ccagggtttgggcagttcatggctggacagttaactcagcatgagtctctggtggcactc
tttgacaaccgcacctggtacaagcagggagtagcggaggagtttgacttccagcctgag
gcctggaaacacccccagctcaatgtcttcgtcactctcctcctcttcgtcgtcatgaaa
ttttggatgtcagcagtggcaaccaccatgccagttccctgtggagctttcatgccagtc
ttcctcataggagctgcatttggacgtctcgttggagagagcatggcggccgtttttcct
gatggcataaccgccgacggcaccgtgtatcccatagtacctggcggctatgcagttgta
ggtgcggcagctctttcaggggctgtcacacacaccgtgtcgacagcggtgatcgtgttc
gagctgaccggtcagatttcccacatcctacccgtgatgatcgctgtgatcctggccaac
gctgtggcccagagcctgcagccctcgctctacgactccatcatccgcatccagaagctg
ccctacctccccgagctgggctgggggcaggagaagtataatatcagagtagaggacatc
atgttgcaggacgtgcgtcacatcactctcacctccacctatcgccacgtccaggatgcc
gtgagcacagcccagctcaaaacactggccctggtggagtccaatgagtccatgatactg
ctcggctccattgagcgctcccagctccagtccctgctctccctgcagctgggtcgcact
cggcggctggagttcctgcgagaacgggcccaggacaacggtgcccacctccccatgctg
ataggccaggacagcccgcccaaggggagccgcggggtccggttcctggtgagcagcgcc
gggatctccacggaagaatcgtcctatagcccaactgtctccaactctcagattcctctg
aagtctgcactaaagacagtgtctgctgtcggcaacacggacacacccaacagctcccaa
acactgtcctgtgaggaccctgagcaggagctggtggagagcaaagctcgggccgtggct
cgtaagagcaggaggcccaggcgagtcaggacccccttggcggctccagacgtggaggat
gacatgactacagctgagattgctgagtgggaggagagacagctggatgaacctgtagac
ttcaagaactgcaaaatagaccctgcccctttccagctggtggagcgcacctccttacac
aagacccacaccatcttctcgctgctgggactggaccatgcttacgtcaccagtacgggc
cggctggtgggagtcgtgtctttgagagagctgaggaaggccatcgagggctcggtgaca
gtcacaggtgtgaaagtgcgccctccactggccagcttccgtgacagtggcaccagcacc
agcgtggcggaggtgaccgaactgcacaagctgtggaatcggcaccggagcctgtcgttg
ccacgggaaccgagcccacccgaattggaggaccagtcggacttggccttggacggcagc
ccagtgttcagcagggactgcaccgagctgtccactcagaacaccacgctgcagtcagat
gaccaatcagaggtggtatgcgagtcagccagcccctcccattccccagaaacacttcca
gagttgccatgtgactatgattccacccacctggatgtggaccaatcaggagctgaggag
gagctttgcccttccccgtctgaagagccgccagaggaagtgtgtgaagcagctgaggcc
gacacaaaggatcttgtagaatga
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