Alosa sapidissima (American shad): 121713939
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Entry
121713939 CDS
T11137
Symbol
eif4ba
Name
(RefSeq) eukaryotic translation initiation factor 4Ba isoform X1
KO
K03258
translation initiation factor 4B
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121713939 (eif4ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121713939 (eif4ba)
03012 Translation factors [BR:
asad03012
]
121713939 (eif4ba)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121713939 (eif4ba)
mRNA cycle factors
Stress granule specific factors
121713939 (eif4ba)
Translation factors [BR:
asad03012
]
Eukaryotic type
Initiation factors
eIF-4
121713939 (eif4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
121713939
NCBI-ProteinID:
XP_041954957
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All DBs
Position
7:6291898..6315272
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AA seq
640 aa
AA seq
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MAASGEDYAKKKNKKGKTLTLTDFLAEDSGGNPPPSYPPTKPTSWADETDDLEGDVSTSW
HTEDDVYRAPPIDRSILPTAPRAAREPNIDRSRLPRSPPYTAFLGNLPYDVTEDSIKDFF
RGLSISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALSLNEENLGNRRIRVDIADQSNE
KERDDRSMSGRDRNRGGDGGPDKTDSDWRARPSSDTDNGPWRDDGGGGGGGGGERSRDTG
SRFESERFRDGPRRDADRYDGGRERYRDRYDDRDRRDYDKGYDSRSGGRRPFGSGFRRDY
DDRRDEYRSGGDRYGDRYGDRDRYGDREDRFERREERREDRGPLQRPKLNLKPRSVPKES
EPSDSSSAPSGRAASIFGGAKPVDTAAKEREVEERLKKEQERLQRQLDEEKVKGPERRPR
ERHPSWRSEDQLERSRTGSESSQSGSMTGRGSRRRESERSVENEVFSGRDEEPPSPSNQA
PSPKQEALPLKVVPAPPPKENAWAKRSALSSSDGDSRPSASPSNANPPKPSSSPSSADEK
DPQRGKDENQADGVRRERGPKRGRAGASGPTAGRGRREAASRDRRKEADRKDGRRERDLR
PAPEPKRYEEPPCPKFSSASKYAALLMDGDQGDDADGSVD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcaggtgaggattatgctaagaagaaaaataagaagggtaagaccctaacc
ctgaccgacttcctggcagaggacagtgggggaaaccctcctcccagctaccctcccacg
aagcccactagctgggcagatgagacagatgacctagagggagatgtgtccacctcttgg
cacacagaggatgacgtgtaccgggcaccgcccatcgaccgctccatcctgcccacagca
ccgcgggctgcccgggagcccaacatcgaccgctcacgtctgcctcgaagccccccctac
actgcctttctgggcaacctgccctatgacgtcactgaggactccatcaaggacttcttc
cgtggcctcagcatcagtgcggtgcgtctccccagagagcccagcaacccagagcggctg
aagggcttcggctatgcagagtttgatgatgtggactctctactgcgcgccctcagcttg
aacgaggagaacttgggcaatcggagaatcagagtggacattgcagaccagtccaatgag
aaagagcgagacgatcgctccatgtctggacgtgatcgcaacaggggtggggatggaggt
ccagacaagaccgactccgactggcgagccaggcccagctccgacacagacaacgggccg
tggagggatgatgggggcgggggcgggggcgggggaggagagcggtcccgcgatacaggc
tcccgattcgagtcagaacgattccgagacgggccgcgacgagacgctgatcgctatgac
ggcggaagagagcgatacagggatcgctacgatgaccgtgaccgcagagactacgataaa
ggctatgactcgcgcagtggtggtcgcagaccatttggcagcggtttccgacgtgattat
gacgacaggcgggatgaatataggagtggtggtgatcgctatggtgatcgctatggagac
cgcgatcgttatggtgaccgggaggacagatttgagagacgggaggagaggcgtgaggat
cgaggtcctctccaaagacccaagctcaacctgaagccccgcagcgtgccaaaagagagc
gaaccaagcgacagctcctccgccccgtcgggccgggccgcctccatcttcggaggggcc
aagcctgtggacactgcggccaaggagcgtgaggtggaggagcggctgaagaaggagcag
gagaggctgcagaggcaactggacgaggagaaggtcaaagggcctgagcgcagacccaga
gagaggcatcccagctggcgcagtgaggaccaactcgagcgctccaggacaggaagtgag
tcttcacaatcaggcagcatgacaggccgaggttctcggcgcagagaaagcgagcgctcg
gtggaaaacgaggtgtttagcgggcgtgatgaggagcctccctcacctagcaaccaagcc
ccgtcccccaaacaggaagcgctgccactcaaggtggtgcctgccccgccccccaaggag
aatgcctgggccaagcggagtgctctgagcagcagcgacggagacagccggccctccgca
tcccccagcaacgccaatccccccaaacccagcagctctccaagctcagctgatgagaaa
gatccccaaagaggcaaagatgagaaccaggccgacggcgtgcgccgggagcgaggaccc
aagcgagggcgggcaggggcctcgggccccacagcgggcaggggccgcagagaggcagcc
agccgagaccggcggaaggaagcggacagaaaggacggcagaagagagcgtgacctcaga
cccgcaccagagccaaagagatatgaggaacctccttgccctaaattcagctcagccagt
aaatatgccgccttgctaatggatggtgatcaaggagatgacgcagatggaagtgtggat
tga
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