Alosa sapidissima (American shad): 121714086
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Entry
121714086 CDS
T11137
Symbol
cntn3a.1
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121714086 (cntn3a.1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
121714086 (cntn3a.1)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Contactins
121714086 (cntn3a.1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
Others
121714086 (cntn3a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
V-set_CD47
Tissue_fac
Pur_ac_phosph_N
Herpes_gE_N
Fn3_nematode
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
121714086
NCBI-ProteinID:
XP_041955190
LinkDB
All DBs
Position
7:32597874..32671781
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AA seq
1030 aa
AA seq
DB search
MKMGLLWKLLVLQSFIGCLAESTTPLRPVFVKQPGSIVFPMHSTETRREVTFSCEAQGYP
PPSYRWRLNDSFIAPRLGSRYSFSGGNLQISHLNKEEDVGIYQCLASNSLGTILSREASL
HIAYLDNFKTQKRSPVRVRDGQGVVLLCGPPAHMGDLTFSWIFNAYPTFVKQDTRRFVSQ
KTGNLYIAKVEPSDVGNYTCVVTNTVTKSSVQGPPTPLVLRSDGIMGEYEPKIEVQFPEV
ISVAKGQTVKLECFALGNPAPSISWTRVEGVPFPRKVDVNKASGVLEIPYFQPEDAGVYE
CVAENARGKNAVKGKLTYYAPPQLTEKPQDLQRPIDESVVWECKASAKPKPSYRWLKNGE
PLEPMENKLQVVNGALTISSLTLMDAGMYQCVAENRHGRVFTNAELRVIAVAPDFSSSAV
RSQTLARQGGDVLIECRPRMSPRGMISWRRGKEALRESHRVSVLDNGSLRISNVTKLDAG
LYTCVARNQYGMASSAGTLVVKEATVITTKAAQVDVTVGESIVLPCQVSHDPSLDVKFTW
FFNELMIQFGSHGGYFEKVGGQSAGDIMIRNIQLRHAGKYTCAIQTKVDRGAIAIDVVVR
GSPGPPSDLQVDEVTETTSSISWRAGPDHHSPILTYIIQARTSFSLGWQAANTVPKLLGI
GQLSATVTELNPWVEYEFRVLATNAIGTGEPSKPSKKVRTKEALPKVTPTRVSGGGGSRS
ELVITWEPVPEELQCGPGFGYVVAFRPHGAQGWMQAAVTSPDASKYSFRDDSIPPFTPYH
VKVGVYNNKGEGPFGSVTTIYSAEEEPTEAPTRVRARSLSSSEVEVSWKPLPWNTTKRRI
MGYELRYWEQDATQDMASVVRTVGDRALAVLRELDGSSTYLISVRAYNSAGVGPHSSVVN
ITTKKPPPSQPPTKVMWNASNSKIILQWDHVKALENESEVMGYKVMYKQNRQARPSVVET
NGTSLELSLPVDEDYVVQIKPVSEGGEGRSSRQITIPRVAGAHVVGAAWRTPVLPALVTL
ALAHTARMLL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggggttgctatggaaactgcttgtgctccagtcattcatcggatgtctggca
gagagtaccacgccgctccggcctgtattcgtgaagcagcctggcagtattgttttcccc
atgcactctaccgaaaccagacgagaagtgacgttcagctgtgaagcccagggataccca
ccaccctcttacaggtggaggctaaatgactctttcatcgcgcccaggctgggatctcga
tatagcttctctggaggaaacctgcagatcagccatctcaataaggaggaggacgtgggg
atttaccaatgcctggcatccaactccttagggaccattctgagcagagaggccagtctg
catattgcctatttggacaacttcaagacgcagaaaaggagtccggttcgagtccgagat
ggccaaggagtggttctactgtgcggccctccggcccacatgggagacctgaccttttcc
tggatatttaacgcgtacccgacatttgtgaagcaggacacccggcgcttcgtgtcccag
aagacaggtaacctgtacatcgccaaagtggagccctcggacgttggcaactacacctgc
gtggtgaccaacacagtgaccaagagcagcgtgcagggcccccccacaccactggtgctg
cgcagcgatggtattatgggtgaatatgagcccaagattgaagtgcagtttcctgaagtc
atctctgtggcaaaaggacaaaccgtgaagctggagtgctttgcattgggaaaccccgct
ccctccatcagctggacgagggtggagggagttcccttccccaggaaggtggatgtgaac
aaggccagtggtgtgctcgagatcccctactttcagccagaagacgccggcgtctacgag
tgcgtcgctgagaacgcccgtggcaaaaatgcagtgaaggggaaactcacgtactatgcg
cctcctcagctgacggagaagcctcaggacctgcagaggccgatcgacgagtcggtagtg
tgggagtgcaaagccagcgccaagcccaaaccctcctataggtggctaaagaacggggaa
ccactggaacccatggagaacaaactgcaggttgtcaacggagccctgaccatctcgtcc
ttgaccctgatggatgctgggatgtaccagtgtgtggcggagaaccggcatggcagggta
ttcaccaatgccgagctcagggttatcgccgtggcgccggatttctcgtcgagcgcggtg
cggagccagactctggccaggcaggggggcgacgtgctgatcgagtgccggcccaggatg
tccccccgggggatgatctcctggaggaggggcaaagaggccctgcgggagagccacaga
gtctctgtactggataatggaagtctgcggatatcaaatgtcaccaaattggacgctggg
ctctacacgtgtgtggccaggaaccaatatggcatggcaagcagcgcggggactctggtg
gtaaaagaggccacggtcatcacgaccaaagcagcgcaggtggacgtgacggtgggtgag
agtatagtactgccctgtcaggtctcccatgacccctcactggacgtgaagttcacctgg
ttcttcaacgagctcatgatccagtttggaagccatggcggatactttgaaaaagttggc
ggacagtctgcgggggacattatgatccgtaacatccaactgaggcatgctggaaagtac
acctgtgccatccagaccaaagtggacaggggggcaatagccattgacgtggtggttaga
ggatcccccggcccaccatcagacctgcaggtagacgaggtcacagagaccacatcgtcc
atctcctggagggctgggcctgaccaccacagtcccatcctcacctacatcatccaggcc
aggacctccttttctctgggctggcaggcagctaacacagtcccgaagctgttgggaatt
ggtcagctgtccgccacggtcaccgagctcaacccatgggtggagtacgagttccgggtc
ctggcaaccaatgccatcgggacaggagagcccagcaagccctcgaaaaaagtccggacc
aaagaagcactgccaaaggtgacccctaccagagtgagtggaggtgggggaagtcgatcc
gagctggtcataacttgggagcctgtcccggaggagctccagtgtggcccaggctttggc
tacgtggtggccttccgtcctcacggggcacagggttggatgcaggcggcggtcacctcc
cccgacgcctccaagtactccttcagggacgacagcatcccacccttcaccccataccat
gtcaaagtgggcgtttacaacaacaagggggagggaccatttggctcagtgacgaccatc
tactctgctgaggaagagccaactgaagcgcccactagagtccgtgccaggagtctgtcc
tcgtctgaggtggaggtgtcctggaaacccctgccctggaacaccaccaaaagacgcatc
atgggctatgagctgaggtactgggagcaggatgcgacgcaggacatggcgagtgtggtg
cgcaccgtgggggaccgggcgctcgctgtcctccgcgagctggacggaagcagcacctac
ctcatcagcgtgcgggcgtataacagcgccggagtaggcccacacagctccgtggtcaac
atcaccaccaagaagccccccccgagccagccaccgactaaggtcatgtggaacgcatca
aactccaagatcatcctacagtgggatcacgtcaaggccctggagaacgagtctgaggtg
atgggctacaaagtgatgtacaagcagaaccggcaggcccggcccagcgtggtggagacc
aacggcacatccctggagctctcgctgcccgtggacgaggactatgtggtccagatcaaa
ccagtcagtgagggaggtgagggccgaagcagcagacagatcaccatcccccgggtagca
ggggcgcatgtggttggagcggcatggcggactcccgtgttgccggcgctggtgacgctg
gctctcgcccacacagccaggatgttgttatga
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