Alosa sapidissima (American shad): 121714146
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Entry
121714146 CDS
T11137
Symbol
parapinopsina
Name
(RefSeq) parapinopsin a
KO
K04251
long/medium wavelength-sensitive opsin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
asad04030
]
121714146 (parapinopsina)
G protein-coupled receptors [BR:
asad04030
]
Rhodopsin family
Vision
Opsin
121714146 (parapinopsina)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
7TM_GPCR_Srsx
TAS2R
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
121714146
NCBI-ProteinID:
XP_041955283
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All DBs
Position
7:28515685..28517414
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AA seq
347 aa
AA seq
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MEQVNLTVSVQPEITPQGSVNVNDHILSRSGYTALAAIIGVFSVTGIILNVTVIVVTLRH
RQLRQPLNYALVNLAVADLGCALFGGLPTMVTNAMGYFSLGRVGCVLEGFAVSFFGIAGL
CSVAVIAVDRYMVVCRTVGTVMFQTRHAVAGVVFSWVWSFVWNTPPLFGWGSYELEGVLT
SCAPNWYSRDAGNMSYIVCYFLLCFAVPFSVIVVSYTRLLRTLRQVAKLQMSEGGSTARA
EMQVARMVVVMVLAFLVTWLPYASFALSVIFSPNLYIDPVIASVPMYLAKSSTAFNPIIY
IFMNRQFRDCAVPFLLCGRNPWASEAEASEAETTVSSVSKSNRVLPS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggtaaacctcactgtcagcgtccagccggaaataacgcctcaggggtcagtg
aatgtgaatgaccacattctgtcacggtcaggctacaccgctttggctgccatcatcggc
gtcttctccgtcacaggcatcatcttgaatgtcaccgtgattgtggtgacacttcgccac
aggcagctgcgtcagcctctgaactacgccctggtgaacctggcagtggcagacctgggt
tgcgccctctttggtggactgccaacgatggtcaccaatgccatgggctacttcagcttg
ggtagagttggatgtgtgctggagggatttgcagtgtctttttttggtattgctggccta
tgttcagtcgcagtaatagctgtagaccgctacatggtggtgtgtcgaacagtggggaca
gtcatgttccagaccagacatgcagtggccggtgtggtcttctcctgggtgtggtcgttt
gtttggaacaccccgccactctttgggtggggcagctacgagcttgaaggggttctgaca
tcctgtgccccaaactggtatagcagagacgcgggaaacatgtcttacatagtgtgctac
ttccttctttgtttcgctgtacctttctccgtcattgtggtgtcttacacgcggcttctg
cggacactccgacaggtagctaaactccagatgtcagaggggggaagcactgcaagggca
gagatgcaagttgctcgtatggtggttgtcatggtgctggctttcctggtcacctggcta
ccctatgcatcctttgccctttctgttatcttttcccccaacttgtacattgacccagtg
attgccagtgtgcccatgtacctggccaagagcagtactgcatttaaccccatcatatac
atctttatgaacagacagttcagagactgtgctgtccctttcttgctctgtggaagaaac
ccatgggcatcagaggcagaggcatcagaggcagagactacagtgtcttcagtgagcaag
agcaacagggttttgccctcatga
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