Alosa sapidissima (American shad): 121714676
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Entry
121714676 CDS
T11137
Symbol
trmt2a
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asad03016
]
121714676 (trmt2a)
Transfer RNA biogenesis [BR:
asad03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121714676 (trmt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
MTS
Methyltransf_11
Methyltransf_4
Ubie_methyltran
Methyltransf_15
Cons_hypoth95
PrmA
RRM_1
TRM5-TYW2_MTfase
Methyltransf_23
Methyltransf_32
N6_N4_Mtase
RRM_PARP14_3
Methyltransf_12
UPF0020
CMAS
RrnaAD
Methyltransf_18
TPMT
FtsJ
AviRa
Motif
Other DBs
NCBI-GeneID:
121714676
NCBI-ProteinID:
XP_041955600
LinkDB
All DBs
Position
8:complement(16862409..16867221)
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AA seq
622 aa
AA seq
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MTDISDTTTLPVTSALNDKDVQEVTEQDVKSKEDPSGGDGDVTVDPNSNVYRYIKEDLFT
SEIFKVEIQNLPKFIGFNDLKKFLTKHGLNPHKIKLFGKQTFAFVTFKNQEERDKAMKVV
HGVQWKGRVLSVRLAKPKADPILRKRKQDEAEDGREPLSKRQGKDGDQDERESEPLSTQL
ANVVTPLWNLPYDEQLRQKEEEVLGILQRLTREIGNTNKAMLPWLFVQKEKNNGTCCPLE
KIRPSPVQTDYRNKCEFLIGMGADGQDKTIGFRLGKYKGGTCAVVGPGDTIHVPPETKKV
VQVVQDYIRTTPYSVYSPETYEGHWRQLTVRTTRTNQVMAMVFFNPQKLTEEEIDGLKKS
MKVYFTEGEGKDSGVTSLYVVKHGQRTSPNTDDLPCEHVTGDEWIHEELLGLKFRISPHS
FFQINTPAAEVLYSAVGEWAQLNQDSTVLDVCCGTGTIGISLAKRVKKVIGIELCQEAVE
DAKVNAKLNGLSNVEFYCGKAEDVFPTVLNAVVSPNVTAIIDPPRAGMHSKVILAIRRAE
HLKRLVYVACNAKAAMNNFIDLCRAPSNRVRGAPFRPVRSMAVDLFPQTPHCETILLFER
VDYSSMDEKEKDQPADAKPQTS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagacatttcagacacaacaaccctacctgtcacttcagcactaaatgacaaagac
gtgcaagaagtcacagagcaagatgtaaaaagcaaagaagatccatcaggaggtgatggg
gatgttactgtggaccccaactccaatgtatatcgatatattaaggaggatctcttcacc
tctgaaatcttcaaagtggagattcagaacctgcccaagttcattggcttcaatgatctc
aagaagttcctcaccaagcatgggctgaacccacataaaatcaaactgtttggcaaacag
acctttgcttttgtcactttcaagaaccaggaggagagagacaaagccatgaaagtggtt
catggtgtccaatggaagggccgtgtcctaagtgtgcggctggccaagcctaaagcagat
cccatcctgaggaagagaaagcaggacgaggctgaagatggtagagagcccctctctaag
cgccaggggaaggacggagaccaagatgagagggaatcagagcctttgagcacacagctt
gctaatgtggtcacccccttatggaacttgccttatgacgaacagttgagacagaaagag
gaagaggtgctggggattctgcaaaggttaaccagggaaataggcaacaccaataaggct
atgttgccctggctgtttgtacagaaggagaagaataatggcacttgttgccctttagag
aagatccggccttctccagtgcagactgactacaggaacaagtgtgagtttctgattggg
atgggagcagatggccaagacaagactataggctttcgccttgggaagtataaaggcggc
acatgcgcagttgtgggacctggtgacaccattcacgttccaccagagaccaaaaaagtg
gtccaagtcgtccaggattacatcaggactactccatactctgtctacagtcctgagacc
tatgagggccactggagacagctgacagtgcggacgaccaggaccaatcaggtcatggcc
atggtgttcttcaaccctcagaaactgacagaagaagagattgatggactaaaaaagtca
atgaaggtgtatttcactgaaggagaagggaaagacagcggtgtcacgtcattatacgtt
gtcaaacatggacaaaggacatcaccaaacacagatgacctaccctgtgagcatgtcact
ggagacgagtggattcatgaggagctcctaggcttgaagttccgcatctcgccacactca
tttttccagatcaacacaccggctgcagaagtgttgtactctgctgtgggggaatgggca
cagctgaaccaggacagcactgtgctcgacgtctgctgtgggactggcaccatcgggatt
tctctggcaaagagagtaaagaaagtaattggaattgagctgtgccaggaagctgtggaa
gatgccaaagtcaatgctaagctgaatggattgagcaatgtagagttctactgtggaaaa
gcggaagatgttttccccactgtgctcaatgcagttgtatcccctaatgtcactgctatc
attgacccaccaagagcaggaatgcactctaaggtaattctggccataaggagagcagag
catcttaagaggctggtttacgtcgcatgcaatgccaaagcagccatgaacaacttcatt
gacctgtgcagagcaccttccaaccgtgtgcgaggagctccgttccgtcctgtgcgatcg
atggctgtggacctgtttccccagacgcctcactgcgagaccatcctgctcttcgagagg
gtggactacagctccatggacgagaaagagaaggatcagcctgctgatgccaaacctcaa
acatcttaa
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