Alosa sapidissima (American shad): 121714706
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Entry
121714706 CDS
T11137
Symbol
unga
Name
(RefSeq) uracil DNA glycosylase a isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121714706 (unga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asad03400
]
121714706 (unga)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
121714706 (unga)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121714706 (unga)
Prokaryotic type
121714706 (unga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
121714706
NCBI-ProteinID:
XP_041955655
LinkDB
All DBs
Position
8
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AA seq
300 aa
AA seq
DB search
MFAVRSLFVHRARSHSIGQAVVTQSSTLTKYTKIIQMKKRKAEDTDAGSSSSLSPEQLDR
IASNKRAALDRLSTHIAPNGIEESWRRALSKEFAKPYFKELMSFVADERKKHTVYPPPHQ
VFTWTQMCDIKNVKVVVLGQDPYHGPGQAHGLCFSVQRPVRPPPSLENMYKELSSDIEGF
QHPCHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDQGWETFTDAVIQWLSTNLDGLVFML
WGAYAQKKGATINKKRHHVLQAVHPSPLSAHRGFFGCRHFSRTNELLKKSGKAPIDWTLL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgtaagatccctgttcgttcatagggcgcgttcacattcaatcggacaagcg
gtagtcacacaaagcagtacgttaactaaatatacaaaaattatacagatgaagaaacga
aaggcagaggacactgacgctggctcctcgtcttcgctgagcccggagcagttggaccgt
attgctagcaacaagcgagcggcactagacagactgtcgacccacattgcccccaatggc
atagaggagagctggcgaagagccctgagcaaagagtttgccaagccttacttcaaagag
ttaatgtcattcgtagcagatgaacggaagaagcacacagtctatcctcccccacaccag
gtcttcacatggacccagatgtgtgacataaaaaatgtaaaggttgtggtattggggcag
gacccataccatgggccaggtcaagctcatggactgtgttttagtgtgcagaggcctgtc
cgtcctccacccagcctagagaacatgtataaggagctaagctccgatatagagggcttc
cagcacccgtgtcacggggacttgacaggctgggccaaacaaggagtgcttctgctcaat
gctgtactaacagttagagcacaccaggctaactcgcacaaggatcagggttgggagacg
ttcacagacgcagtcatccagtggctcagcaccaacctggatggacttgtgttcatgctg
tggggagcctatgcccaaaagaagggagcgaccatcaataagaaacggcaccatgtcctg
caggcggtgcacccttctccactgtcggctcacaggggcttcttcggctgcaggcacttc
tccagaaccaatgagctgctaaagaagtctgggaaggcacccattgactggactcttctt
taa
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