Alosa sapidissima (American shad): 121714798
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Entry
121714798 CDS
T11137
Symbol
abcb9
Name
(RefSeq) ATP-binding cassette sub-family B member 9
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
asad Alosa sapidissima (American shad)
Pathway
asad02010
ABC transporters
asad04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121714798 (abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121714798 (abcb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121714798 (abcb9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121714798 (abcb9)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121714798 (abcb9)
Transporters [BR:
asad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
121714798 (abcb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
AAA_30
ABC_ATPase
nSTAND1
HUTI_composite_bact
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
121714798
NCBI-ProteinID:
XP_041955795
LinkDB
All DBs
Position
8:complement(15635782..15642353)
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AA seq
803 aa
AA seq
DB search
MRATVVLSCNIFFILMDTIISTVLYVRGSQVDIFADELMRFNIFQSALDLWGTLLVRVAL
LLGASIGVLRNRVDGPRRVSKLSTLTTLICLTIMTYALTKLLMFSEKEALLVDPWFLSLV
SWSCVSAMGTMYLWGILAKTSNAVRDSSGEEETKRLVDPLADSSSEPEDEESKTFSGKHR
RCKGAKENSDSRATVGRLLSYCKRDSLLLAVAFFFLMVSAVCEAFIPYYTGKAIDGIVIH
QSMEHFTKPMITLAALAFVSSIAIGVRGGVFSITLARLNIRLRNLLFRSLMRQEIGFFDL
NHTGDITSRLTSDTTQVSDLISLNVNLFLRSFIKAVGFFIFMFGMSWKLTLVTIMGFPYI
AVVSKMYGEYYKKLTKEVQTSLAQANKVAEETISAMRTVRSFANEEQESESYYSKLMVMF
QLNKKQALAYACFMWSSCISELALQVAILFYGGHLVITGQMSGGTLISFVIYELELGECL
ESVASVYTGLMQGVGAAEKVFEYIDREPEHPSGGSSAPDHFKGEVEFLNVSFSYPTRPDT
EILKNVSFTIQPGEVTALVGPSGSGKSSCVGLLENFYTPNEGQVLLDGRPVQDYEHAYLH
SQVALVGQEPVLFARSVQKNISYGLKDIAMDVVVEAAAKANAHDFVVGLPQGYETGVGEK
GAQLSGGQKQRVAIARALIRKPRVLILDEATSALDSESEHIVQQALNDIMQEHTVLMIAH
RLSTVERANNIIVIDNGRIVDQGTHAELMARKGLYFKLVQRQVLGIETGADLLNPPKDLL
WKAVNGRAQSGEESSDSDSNVKL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctactgtcgtgctgagttgtaacattttttttattctcatggatacaatcatc
tcaacagttctatatgtccgcggctctcaggttgatatatttgctgatgaactgatgagg
tttaacatattccagtcagccttggacctatggggaactctgttggtccgagttgctctg
ctgctaggagcctctataggagtcctccggaaccgagtagatggccctcgtagggtctca
aaactgagcacactgaccacccttatttgcctcaccatcatgacctatgcactgaccaag
ctactgatgttctcagagaaagaagctctattggttgacccttggtttttgagcttagtc
tcctggagctgtgtttcggcaatggggactatgtacctctggggaatcctggcaaagacc
tctaatgctgtgagggacagcagtggtgaggaggagacgaaaaggctggtggacccattg
gctgacagcagttctgagccggaggatgaagagagcaaaacgttcagcgggaagcacagg
cggtgcaaaggggccaaggagaattctgactcccgtgctaccgtgggtcgcctgctgtcc
tactgcaagagggattccctgctgctggctgttgccttcttctttctcatggtctctgct
gtttgtgaagctttcatcccctattacactggcaaggcaattgatgggatagttattcac
cagagcatggaacacttcacaaaacctatgatcacactagcagcactggcttttgtcagt
tctatagccattggtgttcgaggaggtgtcttctccataaccttggccagattaaacatc
agactacgcaaccttctgtttagatcactcatgcgtcaagagattgggttttttgattta
aaccatacaggtgacatcacgtcacgtctgacatctgacaccacacaggtgagtgatttg
atctcgctgaatgtcaaccttttcctgcgaagcttcatcaaggccgtgggcttcttcatc
ttcatgtttgggatgtcatggaaactgacattagtcaccatcatgggcttcccctatata
gccgttgtctcaaagatgtatggggaatactacaagaaattgaccaaggaggtgcaaaca
tcacttgctcaagccaacaaggtggcagaggagaccatatcagccatgagaacggtccgc
agctttgccaacgaagagcaagagtctgagtcatactacagcaagttgatggtcatgttc
cagctaaacaagaaacaagcactggcctatgcttgcttcatgtggtcaagttgtatatca
gaactggccctgcaggtagccattctcttttatgggggtcatcttgttataacaggtcaa
atgagtggtgggaccctcatctcttttgtcatctatgaacttgaattgggagagtgctta
gagagtgtagcatccgtctacacaggactaatgcaaggagtgggggccgcagagaaggtt
tttgagtatattgatagggagcctgaacatccgtctggtggcagctcagctccagaccat
tttaaaggagaagtggagttcttaaacgtgtccttcagctatcccactcgaccagacaca
gagatactcaagaatgtttccttcactattcaacctggagaggtgactgcgcttgtgggt
ccatctgggagtggaaagagctcttgcgtgggtttactggagaatttctacactcctaat
gaaggccaagtgctgctggacgggcgtccagtgcaggactatgaacacgcataccttcac
tctcaggtggcacttgtgggacaggagccagtactgttcgcacggtcagttcagaagaat
attagttatggcctgaaagacattgccatggatgttgtggttgaagcagctgctaaggcc
aatgcacatgactttgtagttggcctcccccaaggctatgaaacaggggtgggagagaag
ggagcccagctgtcaggggggcagaaacagcgcgttgccatcgcccgggctctcatcagg
aaacctcgtgtcctcatactggatgaggccactagtgccttggattctgagagtgaacat
attgttcagcaggccctgaatgatatcatgcaagaacacacagtgctgatgatcgctcat
cgcctgagcaccgtggagagggccaacaacatcattgtgattgacaacggccgtatagta
gatcaggggacgcatgctgaactcatggcccggaaaggactgtacttcaagttggtccag
aggcaggtcctgggtatagaaacaggagcagacctacttaaccctcccaaggacttgctg
tggaaggcggtgaatggtagagcacagagtggagaagaaagcagtgactctgatagcaat
gtaaagttgtaa
DBGET
integrated database retrieval system
