Alosa sapidissima (American shad): 121714810
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Entry
121714810 CDS
T11137
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121714810 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121714810 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121714810 (pdlim2)
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
SNAPC3
zf_C2H2_13
Motif
Other DBs
NCBI-GeneID:
121714810
NCBI-ProteinID:
XP_041955817
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All DBs
Position
8:7515555..7571093
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AA seq
371 aa
AA seq
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MALTVNLLGPSPWGFRISGGRDFKKAITVSKVNGGSKAERAALQPGDIILEINGENTGDM
LNVEAQNKIKNSQTQLQLLVERPDPPTPGQTNGITTPDHLVGRFQEAVQVSRDENQNYRE
YTISSPVSVSPGPYSPEPPASPERKTDRITPTNTKSLQQLRSWSPEEKNPNHRLSRPLSQ
EFSSPDLRFNSVSSRTPTPPGRYSPHSPVDREMSVSPRRSSDTMQRFDRDSEVYKMIQEN
KESRTAPRQSNTFRMLQEVLEADEKEAAVRFPGKLSASPPKPTPAASSVAGVQKYQVCEK
CGNNIVTQVVRIMDDRFRHPECYTCTECGLNLKMRGHFWVGDEMFCEKHARERYTGPGSN
APRRHTISPRH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcactgacggtgaacctgctcggcccatctccatggggcttcagaatatcaggaggg
agggacttcaagaaggccataacagtctctaaggtgaacggagggagtaaggcggagagg
gctgccctgcagcctggcgacatcatcctggagatcaacggcgagaacacgggcgacatg
ctgaacgtggaggcccagaacaagatcaagaactcccagacccagctgcagctgctggtg
gaaaggcctgatcctcccacaccgggacagaccaatgggatcaccaccccagaccatctg
gttggacgcttccaggaggcagttcaggtgagcagggatgagaatcagaactacagggag
tacaccatctccagccctgtgtccgtctctcctggaccctactcccctgagccgcccgca
agccccgagaggaagaccgatagaatcacccccaccaacactaagagcctgcagcagctg
cggtcatggtcccccgaggagaaaaatcccaaccatcgactctccaggcctctctcacag
gagttctcctctccggacctgcggtttaactctgtctccagtcggacccccacccctcct
ggccgctactccccccacagtccggtggaccgcgagatgtccgtatcccccagacgcagc
tctgataccatgcagcggttcgaccgagactctgaggtctacaagatgatccaggagaac
aaggagtcgcgcacggctccgcgtcagtccaacacgttccgcatgctgcaggaggtgctg
gaggcagatgagaaagaggctgccgtccgtttccctgggaagctgtccgctagcccaccc
aagcccacccccgcagcctcctcagtggccggagtgcagaagtatcaagtctgcgagaag
tgcggcaacaacatagtcacgcaggtggtgcgcatcatggacgaccgcttccgccacccg
gagtgctacacctgcacggagtgcggcctcaacctgaagatgcgcggccacttctgggtg
ggcgacgagatgttctgcgagaagcacgcccgcgagcgctacacggggcccggcagcaac
gccccccgacgccacaccatctccccccgccactga
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