KEGG   Alosa sapidissima (American shad): 121714828
Entry
121714828         CDS       T11137                                 
Symbol
ccnh
Name
(RefSeq) cyclin-H
  KO
K06634  cyclin H
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03022  Basal transcription factors
asad03420  Nucleotide excision repair
asad04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121714828 (ccnh)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121714828 (ccnh)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    121714828 (ccnh)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asad03021]
    121714828 (ccnh)
   03400 DNA repair and recombination proteins [BR:asad03400]
    121714828 (ccnh)
Transcription machinery [BR:asad03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     121714828 (ccnh)
DNA repair and recombination proteins [BR:asad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     121714828 (ccnh)
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N Cas_Cas4 CHD1-like_C
Other DBs
NCBI-GeneID: 121714828
NCBI-ProteinID: XP_041955848
LinkDB
Position
8:12398366..12407031
AA seq 319 aa
MYHISSQKKYWLFENEASLEKQRYEANQKFRSKTLASGKAVNESLFLDHHEEMVIFRHYE
KRLVDFSVIFKPAMPKSVVGTAIMYFRRFYLNNSLMEYHPRTIMLTCAYLSCKVDEFNVS
STQFVGNLQETPAGQEKALEQILEYELLLIQQLNFHLVVHTPYRPMEGLLIDLKTRYPML
ENPEVLRKAADDFLNRATVTDAGLLASPSQIALTAVLNSASRAGLNMESYLTECMGFKDK
ESMSKLMDTMRKIKQLTKKYELPKPEEVNMCKQKLERIHAEFSSTNLKRKRGHEEEHEVP
KKPLLTEDEVWTDEDLDSL
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtaccacatcagttctcagaaaaagtattggctattcgaaaatgaggccagcctggag
aaacaaagatatgaagctaatcagaagttccgctcaaagacattggcaagtggaaaggca
gtcaacgagtctttatttcttgaccaccatgaggagatggtgatcttcagacactatgag
aagaggctagtggacttcagtgtcattttcaaacctgcaatgccaaaatccgtcgtgggc
acagcaatcatgtattttcggaggttttatttgaacaattcactaatggagtatcatcct
aggacaataatgttgacgtgtgcatacctttcctgcaaggtggacgagttcaatgtgtcc
agcacacagtttgtaggcaatcttcaggagacacctgcaggacaagagaaggccttggag
cagatcttagagtatgagctcctcctcatccaacagctcaacttccacctggtggttcat
accccttatcgaccaatggagggcttactcatcgacctgaagactaggtatccaatgctg
gagaatcctgaggtgctgaggaaggctgcggatgacttcctcaaccgggctaccgtgact
gatgccggactcttggcctcaccctcccaaattgccctgaccgctgtgcttaacagtgct
tctcgggccgggctcaacatggagagctatttgacagaatgcatgggatttaaggataag
gaaagtatgtcaaaactaatggacaccatgagaaaaattaaacaactcaccaaaaaatat
gagctgccaaaacctgaagaggtcaacatgtgtaaacagaagctggaaaggatccacgca
gaattctcatccactaacctgaaaaggaaacgaggacatgaagaggaacatgaggtcccc
aaaaagccacttctcactgaggacgaggtctggaccgatgaggatctggactccctgtga

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