Alosa sapidissima (American shad): 121714828
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Entry
121714828 CDS
T11137
Symbol
ccnh
Name
(RefSeq) cyclin-H
KO
K06634
cyclin H
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03022
Basal transcription factors
asad03420
Nucleotide excision repair
asad04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121714828 (ccnh)
09124 Replication and repair
03420 Nucleotide excision repair
121714828 (ccnh)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121714828 (ccnh)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121714828 (ccnh)
03400 DNA repair and recombination proteins [BR:
asad03400
]
121714828 (ccnh)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121714828 (ccnh)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121714828 (ccnh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
Cas_Cas4
CHD1-like_C
Motif
Other DBs
NCBI-GeneID:
121714828
NCBI-ProteinID:
XP_041955848
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All DBs
Position
8:12398366..12407031
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AA seq
319 aa
AA seq
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MYHISSQKKYWLFENEASLEKQRYEANQKFRSKTLASGKAVNESLFLDHHEEMVIFRHYE
KRLVDFSVIFKPAMPKSVVGTAIMYFRRFYLNNSLMEYHPRTIMLTCAYLSCKVDEFNVS
STQFVGNLQETPAGQEKALEQILEYELLLIQQLNFHLVVHTPYRPMEGLLIDLKTRYPML
ENPEVLRKAADDFLNRATVTDAGLLASPSQIALTAVLNSASRAGLNMESYLTECMGFKDK
ESMSKLMDTMRKIKQLTKKYELPKPEEVNMCKQKLERIHAEFSSTNLKRKRGHEEEHEVP
KKPLLTEDEVWTDEDLDSL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtaccacatcagttctcagaaaaagtattggctattcgaaaatgaggccagcctggag
aaacaaagatatgaagctaatcagaagttccgctcaaagacattggcaagtggaaaggca
gtcaacgagtctttatttcttgaccaccatgaggagatggtgatcttcagacactatgag
aagaggctagtggacttcagtgtcattttcaaacctgcaatgccaaaatccgtcgtgggc
acagcaatcatgtattttcggaggttttatttgaacaattcactaatggagtatcatcct
aggacaataatgttgacgtgtgcatacctttcctgcaaggtggacgagttcaatgtgtcc
agcacacagtttgtaggcaatcttcaggagacacctgcaggacaagagaaggccttggag
cagatcttagagtatgagctcctcctcatccaacagctcaacttccacctggtggttcat
accccttatcgaccaatggagggcttactcatcgacctgaagactaggtatccaatgctg
gagaatcctgaggtgctgaggaaggctgcggatgacttcctcaaccgggctaccgtgact
gatgccggactcttggcctcaccctcccaaattgccctgaccgctgtgcttaacagtgct
tctcgggccgggctcaacatggagagctatttgacagaatgcatgggatttaaggataag
gaaagtatgtcaaaactaatggacaccatgagaaaaattaaacaactcaccaaaaaatat
gagctgccaaaacctgaagaggtcaacatgtgtaaacagaagctggaaaggatccacgca
gaattctcatccactaacctgaaaaggaaacgaggacatgaagaggaacatgaggtcccc
aaaaagccacttctcactgaggacgaggtctggaccgatgaggatctggactccctgtga
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