Alosa sapidissima (American shad): 121714909
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Entry
121714909 CDS
T11137
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121714909 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
asad01007
]
121714909 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asad03016
]
121714909 (tars1)
Enzymes [BR:
asad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
121714909 (tars1)
Amino acid related enzymes [BR:
asad01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121714909 (tars1)
Transfer RNA biogenesis [BR:
asad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121714909 (tars1)
Prokaryotic type
121714909 (tars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
121714909
NCBI-ProteinID:
XP_041956042
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All DBs
Position
8:10810697..10827126
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AA seq
722 aa
AA seq
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MEEEKVAQQMKALHVEEGKKDGAHGDKGGKKKSKGATADAAGKAELNPPPQYIEDRLALY
NKLKAEHDALLAERAEKDSKPIKITLPDGKVVDGDSWKTTPYTVACGISQGLADNTVIAK
VNNGVWDLDRPLEQDCSLQLLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIES
GFYYDMFLESEGVSSNDFPGLENLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRILN
EKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMESLQRIYGIS
FPDPKMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLIQFIR
SEYRRRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEAEKETFALKPMNCPGHCLMFD
HRPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIESEIKGCLD
FLRTVYNVFGFTFKLNLSTRPEKFLGEVEVWDQAEKQLENSLNEFGEKWVLNPGDGAFYG
PKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMI
AILTENYGGKWPLWLSPRQVMVVPVGPTCEEYAEKVRQQFHSAGLMTDVDVDPGCTLNKK
IRNAQLAQYNFILVVGEKEKTSDTVNVRTRDNKVHGERSVTDCIERLKQLKDSRSRNAEE
EF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaaagttgctcagcagatgaaggcgctgcatgttgaggaagggaagaag
gacggagctcatggggataaaggagggaagaaaaagagcaaaggtgctacagcggatgct
gcaggaaaagcagagctcaacccccctccccagtacatcgaggatcgcctggccctttat
aacaagctgaaagcagagcatgatgccctcttggctgagcgggcagagaaggacagcaag
cccatcaagatcaccctgcccgatgggaaggtggtggatggggactcctggaagaccacc
ccgtacacagtggcctgcggcatcagccaaggccttgctgataacactgtgattgctaaa
gtgaacaatggtgtgtgggacctggacagacccttagaacaggactgcagcctgcagctc
ctcaagtttgacgacgaagaagctcaagctgtgtattggcactccagtgcccacatcatg
ggcgaggccatggagcgcgtgtacggtggctgcctgtgctacggaccacccatcgagagc
ggcttctactatgacatgttcctggagagcgaaggggtttcgagtaatgacttccccggt
ctggagaacctgtgtaagaaaatcatcaaggagaagcagccctttgagaggctggagata
aagaaggagactctcctggaaatgttcaagtacaacaagtttaagtgcaggatcttgaac
gagaaagtgaccactccaaccaccactgtttacaggtgtggtcctttaattgacctctgc
agaggtccccacgtgagacacactggaaagatcaaggccctgaagatccataagaactcg
tccacctactgggaggggaaggcggacatggagagcctgcagcgaatctacggcatctcc
ttccccgaccccaagatgctaaaggagtgggagaagttccaggaggaggccaagaaccgt
gaccaccgcaaactgggacgagagcaggacctgttcttcttccacgacctgagccccggc
agctgtttcttcctgcccaagggggcgtacatctacaacactctcatccagttcatcagg
agtgaatacaggaggcggggcttccaggaagtggtcacccccaacatctacaacagcaag
ctgtggcagacctccggccactggcagcactacagcgagaacatgttctccttcgaggcg
gagaaggagactttcgctctgaagcccatgaactgcccaggccactgtttgatgtttgac
caccggccacgctcctggagagagctgcctctgcgcatggcggactttggcgtcctgcac
cgtaacgagctgtcgggggcgctgacgggactgacccgcgtgcggcgcttccagcaggac
gatgcccacatcttctgcaccatggaccagattgagagcgagatcaaagggtgccttgac
ttcctgcgcactgtctacaacgtgttcggcttcacgttcaagctgaacctctccacccga
ccggagaagttcctgggagaggtggaggtctgggaccaggccgaaaagcaactggaaaac
agtctgaacgaatttggagagaagtgggtcttaaacccaggcgacggagctttctatgga
ccaaagattgacattcagatcaaggatgccatcggtcggtaccaccagtgtgccaccatc
cagctggacttccagttgcccatccgcttcaacctcacctttgtcagccatgatggcgat
gacaagaagaggccagtgatcatccacagagccattctgggatcagtggagagaatgatc
gccatcctgacagaaaactatggagggaaatggcctctctggctgtctccacggcaggtg
atggttgtacctgtcggacctacttgtgaggagtacgctgaaaaggttcggcagcagttc
cacagcgcgggcttgatgacggatgtggatgtggaccctggctgcaccctcaacaagaag
atcaggaatgcccagctggcccagtacaacttcattctggtggtgggagagaaggagaag
accagcgacactgtaaacgtgcgcacacgtgacaacaaggtccacggagaacgcagcgtg
accgactgcatcgagcggctcaagcagctgaaggactcgcgctctcgcaacgcagaggaa
gagttctga
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