Alosa sapidissima (American shad): 121715008
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Entry
121715008 CDS
T11137
Symbol
grid2
Name
(RefSeq) glutamate receptor ionotropic, delta-2 isoform X1
KO
K05207
glutamate receptor delta-2 subunit
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121715008 (grid2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121715008 (grid2)
Ion channels [BR:
asad04040
]
Ligand-gated channels
Glutamate (ionotropic)
121715008 (grid2)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
121715008
NCBI-ProteinID:
XP_041956205
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All DBs
Position
8:complement(20707242..21031658)
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AA seq
1009 aa
AA seq
DB search
MKVFPAVVLLVTIWCQEWKPLLADSIIHIGAIFDESAKKDDEVFRLAVADLNLNNEILET
EKITVSVEFVDGSNPFQAVQEACELMNRGILALVSSIGCMSAGSLQSLADAMHIPHLFIQ
RASAGTPRSSCPPTSRAPNADDYTLFVRPPVYLNDVILRVVTEYTWQKFIIFYDQQFDIR
GIEDFLDQSSQQGMDVSLQKVEANINMMITSMFRTMRMEELHRYRDTLRRAVLFMSPATA
KAFITEVVETNLVAFDCHWIIINEEISDLDVQELVMKSIGRLTLVRQTFPMPQNTTQRCV
RSNHRINTSLCDPKDPKAQTLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLSCIRKG
SKPWQGGRSMLETVKKNGVSALTNLLEFSDNGTNPNIHFEILGTNYGEDRGRGVTRLATW
DPVHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFSIDVLDALS
NYLGFKYEIYIAPDHKYGIQQADGTWNGLIGELVSKRADVGLSALTITPERESVVDFTTR
YLDYSVGVLLRRAERTVDMFACLAPFDLSLWACIAGTVLLVGILVYLLNWLNPPRLPMGS
VSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGIWWLFALIVISSYTANLAAFLTIS
RIENSIQSLQDLSKQTDLPYGTVLDSAVYDQVRNKAMNPFERDPMYSQMWRMINRTGGVE
NNVEESKEGIRKVKYGRFAFVWDAAVLEYVAINDEDCSFYTVGSNTPDRGYGIAMQHGSP
YRDIFSQRILELQQNGDMDILKLKWWPRDGPCDMQGAMGGQQRGSALDIHSFAGVFCVLA
AGVVLSCLIAMVETWWSRRKGSRVPSKEDDKEIDLEHLHHRVNSLCTEDDSPHKQFSTSS
IDLTPLDMDSMPAARQALEQISDFRNTHITTTTFIPEQIQTLSRSLSAKTGGGFAYGSVQ
DHRTGTFRQRAPNGGFFRSPIKTMSAIPYQPTPQPNFGYGNDPDRGTSI
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttttccggcagtggtcttattggtcactatttggtgtcaggagtggaagccc
ttgcttgccgattcaatcatacatatcggagccatcttcgatgagtctgccaagaaggac
gacgaggttttccgtctcgccgtggccgacctcaacctcaacaacgagatcctggagacg
gagaagatcaccgtctcggtggagtttgtggacgggagcaatccctttcaggccgtccag
gaagcctgtgagctgatgaaccggggcatcctggccctggtcagctccatcggctgcatg
tcggcaggctcgctgcagtcgctggccgacgccatgcacatcccgcacctgttcatccag
cgggcgtcagctggcacgccacgctccagctgcccgcccaccagccgtgcgcccaacgcc
gacgactacacgctgttcgtgcggccgcccgtctacctgaacgacgtcattctgcgtgtg
gtcaccgagtacacctggcagaagtttatcatcttctacgaccagcagtttgatatccgc
gggatcgaggacttcctggaccagtcgtcgcagcagggcatggacgtgtctctgcagaag
gtggaggccaacatcaacatgatgatcaccagcatgttccgcaccatgcgcatggaggag
ctgcaccgctaccgggacacgctgcgccgcgccgtgctcttcatgagccccgccaccgcc
aaggccttcatcaccgaggttgtggagactaatctggttgcctttgactgccactggatc
atcatcaatgaggaaatatctgacctggatgtgcaggagctggtgatgaagtccatcggg
cgtctgaccctggtgcgccagaccttccccatgccgcagaacacaacgcagcgctgtgtg
cgcagcaaccaccgtatcaacacgtccctctgcgacccaaaagaccccaaagctcagaca
ctggagatcacaaaccgctacatctacgacacagtgctgctgctggccaacaccttccac
aggaagctggaggaccgcaagtggcacagcatggccagcctcagctgcatccgcaagggc
tccaagccctggcagggcggacgctccatgcttgagactgtcaagaagaatggagtgagt
gctctcaccaacctgctggagttcagtgacaacggaaccaaccccaacattcactttgag
atcctgggcaccaactacggggaggaccgcggccgtggagtgaccaggctggccacttgg
gaccccgtgcacggcctgaacgggaccctgacagacaggaagctggagaacaacatgagg
ggcgtagttctgcgagtggtgactgtcctggaggagccattcgtgatggtgtcggagaac
gtcttggggaaacccaagaagtaccaaggcttctccatcgacgtcctggacgccctctcc
aactacctcggctttaagtacgagatctacatcgctccagatcacaagtacggcatccag
caggcggacggcacgtggaatggcctgattggagagctcgtctccaagcgggcagacgta
ggactctcggccctgaccatcaccccggagcgcgagagcgtagtggacttcaccacgcgc
tacctagactactcagtgggcgtgctgctgcgccgggccgagcgcacggtggacatgttc
gcctgcctggcgcccttcgacctctcgctgtgggcctgcatcgcgggcaccgtgctgctg
gtgggcatcctggtgtacctgctgaactggctgaacccgccccgcctgcccatgggctcc
gtctcgtccaccacactctacaactccatgtggttcgtctacggctccttcgtccagcag
ggtggagaagtgccttacaccaccctggccacgcgcatgatgatgggcatctggtggctg
tttgctctgattgtcatctcctcctacaccgccaacctggctgccttcctcaccatcagc
cgcatcgagaactccattcagtctctgcaggacctttctaaacagacggacttgccgtac
ggcaccgttctggactcggccgtgtacgaccaggtgcgcaacaaggccatgaaccctttc
gagcgggaccccatgtactctcagatgtggcgcatgatcaacagaacaggaggcgttgag
aacaacgtggaggaatccaaggaaggcatccgcaaggtgaagtacgggcgctttgcattt
gtgtgggacgcagctgtgctggagtacgtggccatcaacgatgaggactgctctttttac
acagtgggaagcaacacgccagatcggggatacggcatcgccatgcaacacggcagtcct
tacagggacattttctctcaaaggattctggagctgcagcagaacggggacatggacatt
ctgaagctgaagtggtggccgcgggatgggccgtgcgacatgcaaggggcgatgggcgga
cagcagcgggggagcgcgctggacatccacagcttcgccggggtcttctgtgtgctggcc
gccggcgtggtgctctcgtgcctcattgccatggtggagacctggtggagccggcgcaag
ggctccagggtgccctccaaggaggacgacaaagagatcgacctggaacaccttcaccac
agggttaacagcttgtgcacggaggacgacagcccccacaagcagttctccacctcctct
atcgacctgacgccgctggacatggactccatgcccgccgcccgccaggccctcgagcag
atcagcgacttccgcaacacgcacatcaccaccaccaccttcatccccgagcagatccag
accctcagccgcagcctctcggccaagaccggcggcggcttcgcctacggctccgtgcag
gaccaccggactggaaccttccggcagcgcgcccccaacggaggattcttccgcagcccc
ataaagaccatgtcggccatcccataccagcccaccccgcaacccaacttcggctacggc
aacgacccagacaggggcacgtccatatga
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