Alosa sapidissima (American shad): 121715030
Help
Entry
121715030 CDS
T11137
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121715030 (adamts13)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
121715030 (adamts13)
Peptidases and inhibitors [BR:
asad01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121715030 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_5
Adt-1
Reprolysin_3
TSP1_spondin
TSP1_CCN
Reprolysin_4
Reprolysin_2
CUB
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
121715030
NCBI-ProteinID:
XP_041956252
LinkDB
All DBs
Position
8:complement(34188836..34225216)
Genome browser
AA seq
1585 aa
AA seq
DB search
MATSIVALALLGLLLPLPRSGLAGAPAWETSFLNSLDPHDTEYYFGTIATDAVPDFELLW
TDCLWDEASAELQSPRRCVLHTQSGSLLLGRGEQEGSLSCPSVVETRLNSTASTVRKSEP
GCCETLEALAPPHARAALSLCRGCMHGVVVTEGRRLHIRPLLQKHVPLAPPNMPPHSLTL
IGMHLTQRATGAAAAVTPSPDKALEGIHVPQRPTAATNPSSSAVQQRQRRAALSSEVSHL
ELLVVVGSDVQQVHRQDTERYILTNLNIASELLRDATLGANMRVHLVRMIILTEHEPEIQ
ISTNISSSLRSVCQWGRKVNPANDSDPLHADLLLYITRFDLVLPNGNKLVRGVTQLGGAC
SSQWSCVITEDTGFDLGITIAHEIGHSFGINHDGTGNTCSSSGFMMASDGGYNSMDLTWS
QCSREQLLRFFSAGKAECVADLPVMAGSLQDWKPGLYYGVDDQCRIAFGSSARACSFTAN
DMEACRVLSCHTAPGDQTSCTRLLVPLLDGTECAPNQWCLKGRCVSPSSLSGSMVVHGSW
SRWSEFSPCSRTCGGGITFRKRQCNNPRPAFGGRECEGVDTEAELCHRQPCVSTQLDFMA
QQCSKTNPQPLSLSPGHAPRYTWAPAVGHVSGHMQCKLMCMSEGEDFMVSRGSKFTDGTR
CEPDQPVAPGIVTACLGGLCEEFGCDGALHSGKVEDVCGVCGGNGSTCQLTSLSYHGGGA
RDYVTFLTVPINATQVRIINTRPVFTHLAVLVGQQYVVSGRGSIALNTTYPSALEDEHLA
YTLYLSSDLLPRMEEITLQGPVQDNIHIQVYRKYGKAYGEQTDPNISCQYYTPYRAGQGS
PQGHWSTITGPCTVTCGTGHQQVASVCVDQATLEHLDQVFCPPSGSMPTLQRECSMPPCP
ARWEVGEFGPCSASCGGGEQVRAVRCVQSQAEVPASLCPQDPVPATVGMCATQPCPARWR
VSDPGVCSAVCGPGEARRNVSCVRVQRGQETEVDGSMCAEPRPLDSVPCVVDVCPIGWET
MGKSQPDHVLSPVIVPRSRAERVYVWSPVIGHCSRSCGNGTLEVWYTCVDHQTRFGVAEF
HCDPSSKPGPHTEPCNTTPCPATWRYMQGVCSVTCGGGLARRVLYCARTTEGAETDEVVS
DNKCQAVSRPLDMVECNTQPCPARWKVVSVGSCSASCGLGVSQRSVLCVQFERGQEQAIP
EDRCAQVKRPPSLVPCRVQLCTFTWDMREWTKCSAACGYGIQSRPVSCVGPSQPSPVSPL
LCMHLPKPLTIQACYARDCSVPAHTHTHTPHTHTTHTHTTHQPVPGQGASLDSEEEADRD
ADPLLPTQVPLGRRAVMSSLTPTHPSTSPTPQLASITTATPTLPSKTDVCGKLLLQPSGT
IDLRNVTQRRCIVAIGRPLDEVINIKFESSTLDCKAKEYMAFYDRLILIKKCERMKGKEL
TSRTNVLLVRQGRITPGNGVMLTYSSKKNPKKSHQQDCDVQLFASSGVIENPTRNSSSPA
QACRVFIDAPPSLQIKIQALSMFNTTSTHTTYVLIRDVDTLKTTVFSGRQLFLWSSEGSR
AEVEFHGDYQHIKGSFHAQYSLVRP
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagcatagtagcactggcgttgctcggcctgctgctgcccctgccaaggagt
ggactagcaggagccccagcctgggagacgagcttcctaaactcactggacccccacgat
actgaatattactttggcaccatcgctactgatgcagtgcctgactttgagctactgtgg
acagactgtctttgggatgaggcgtctgctgagctccagagccccaggcgctgtgttctt
cacacccagagcgggagcttgctgctgggccgcggtgagcaggaggggtccctgtcctgc
cccagtgtggtggagacgaggctgaactccaccgcgagcaccgtgcggaagagcgagccc
gggtgctgtgagaccctggaggcgctggccccgccccacgccagagccgccctctctctc
tgcagggggtgcatgcatggtgtggttgtgacggaggggaggaggctgcacatccgcccg
ctgctacagaagcatgtccccctggcaccacccaacatgcctccacacagcctgaccctc
ataggcatgcacctcacccagagggctactggggctgcagcagctgtgaccccatcaccc
gacaaagccctcgaggggatacacgtcccacaaaggcccacggcagctacaaacccttcg
tccagtgcagtccagcagaggcagcggcgggctgctctgagctctgaggtgtctcatctg
gagctgctggtggtcgtggggtctgatgtccagcaggtgcatcgtcaggacacagagaga
tacatcctcaccaacctcaacatcgcttcagagctcctgagagacgccactctgggggcc
aacatgagagtccacctggtccgcatgatcatcctcacagagcacgagcccgagatccag
atctccaccaacatctcgtcatctctgcgaagtgtgtgtcagtggggtcgtaaggtcaac
ccagccaacgactctgaccctctacatgcagaccttctgctatatatcacacgatttgac
ctggtgctgcccaatgggaacaagcttgtgaggggggtgactcagctgggcggagcctgc
tccagccaatggagttgcgtcatcacagaggacactgggtttgacctgggcatcaccatc
gctcatgagatcggacacagctttggcataaatcacgatgggacaggtaacacctgcagc
agtagtggcttcatgatggcgtcagacggaggctacaacagcatggatctcacctggtct
cagtgcagcagggagcagctgctccgcttcttcagcgcagggaaagctgagtgcgtggca
gacctgccagtgatggccggctctctgcaggactggaagcctggcctgtactacggggtg
gacgaccagtgcaggatcgcctttggcagctccgcccgggcctgctccttcacagccaat
gacatggaagcgtgtcgtgtgctgtcctgccacacggctcctggagaccagacttcctgc
acacgcctgctggtgccactgctggacggcacagagtgcgcccctaaccagtggtgcctg
aaggggcgctgtgtctccccctcctctctgagcggctccatggtggtgcacggctcctgg
tcccgctggtccgagttctccccctgctcacgcacctgtggagggggcatcaccttcagg
aagcgccagtgcaacaaccccagacctgcgttcggagggagagagtgtgaaggggtggac
actgaggctgaactttgtcaccgtcagccgtgtgtctctacgcagttggacttcatggcc
cagcagtgctccaagaccaacccccagcccctctccctctcccctgggcacgccccgcgc
tacacctgggcacctgcggtgggacacgtctcaggtcacatgcagtgtaagctcatgtgt
atgtctgagggggaggacttcatggtcagccgcgggtcaaagttcactgatgggacgcgc
tgtgaacccgaccagccggtggctcctgggatcgtcaccgcctgcctgggagggctgtgc
gaggagtttggctgtgatggagcgttgcattctgggaaggtggaggatgtgtgtggggtg
tgtggaggaaatgggtccacctgtcaactcacctccctctcttaccacggaggaggagct
agagactacgtcaccttcctgacggtgcccatcaacgccacacaggtccgcatcatcaac
accaggcccgttttcacacacctggctgtgttggtgggtcagcagtatgtggtgtcaggg
aggggcagtatcgcactcaacaccacctacccctctgccctggaggacgagcacctggcc
tacaccctgtacctctcctctgacctgctgccccgcatggaggagatcactctacaggga
cctgtacaggataacatacacatacaggtgtatcgtaagtatggaaaagcatatggagag
cagactgaccccaacatcagctgccagtactacacaccttaccgagctggacagggctca
cctcaaggccattggtcaaccatcacagggccctgcacagtcacctgtgggacaggccac
cagcaggtggcgtcggtgtgtgtggaccaggctactctggagcacctggaccaggtcttc
tgtccgccgtccggcagcatgccaactctgcagagggagtgcagcatgcccccctgccca
gccaggtgggaggtgggagagtttggtccctgcagcgcctcctgtggcgggggagagcaa
gtgcgtgcggtcaggtgtgttcagtcccaggctgaagtgccagcctctctttgccctcag
gaccctgtgcccgccacagtgggcatgtgtgccacccaaccctgcccagccaggtggcgc
gtgtccgacccaggtgtgtgttctgcggtgtgtgggcccggtgaggcccggcggaacgtg
tcgtgtgtgcgggtccagcgcggtcaggagacggaggtggacggcagtatgtgtgcagag
ccacggcccctggactctgtgccctgcgtggtggacgtgtgtcccatcggctgggagacc
atgggcaagtctcagccagatcacgtactttctcccgtgattgttccgcgctcaagagcg
gagcgtgtctacgtatggagccctgtgattggacactgctcacggagctgtgggaacggt
acactggaggtgtggtacacctgtgtggatcaccagacacggtttggagtggccgagttc
cactgtgacccgtccagtaaacctggaccccacacagaaccctgtaacaccacaccctgc
cctgctacgtggcgctacatgcagggtgtgtgcagtgtgacatgtggaggagggctggca
cgcagggtgctgtactgcgccaggaccacagagggcgccgagacggacgaggtggtcagc
gacaacaagtgccaggccgtctctagaccactggatatggtggagtgtaacactcaaccc
tgtcctgccaggtggaaggtggtgtccgtggggtcgtgctctgcgtcctgcggcctgggt
gtgtcccagaggagtgtgttgtgtgtgcagttcgaacgcggtcaggagcaggccattcct
gaggacaggtgtgctcaggtgaagaggcctcctagcctcgtgccctgcagagtgcagctg
tgcaccttcacctgggacatgcgcgagtggaccaagtgctctgcggcgtgtggttatggg
atccagagccggcccgtgtcctgtgtgggtccatctcagcccagcccggtcagccccctg
ctctgcatgcacctccccaaacccctcaccatccaggcctgctacgccagggactgcagc
gtccccgcacacacacacacacacactccacacacacacaccacacacacgcacaccaca
caccagcctgtgccgggccagggcgccagtctggactcggaggaggaagcagaccgagac
gcagacccacttctgcccacccaggtgccgctgggtaggagagctgtgatgtcatcactg
acccccacacacccctccaccagccccaccccccagctggcctccatcaccacggcaacc
ccaaccctgccttctaaaacagatgtttgtgggaagcttcttctccagccgtccggaacc
atagacctaagaaacgtcactcagaggagatgtatcgttgctattggccgaccgctggat
gaggtcataaacatcaaatttgagtccagcactctggactgtaaggccaaggagtacatg
gcgttctacgaccggctcatcctgatcaagaagtgtgagaggatgaagggcaaagagctg
acgtcacgtaccaatgtgctgctcgtgaggcagggacgcatcacccccggcaacggagtg
atgctcacctacagcagcaagaagaacccaaagaagagccatcagcaggactgtgacgtg
cagctgtttgcctcctctggggtgattgagaacccgacgcggaactcgtcctctcctgct
caggcctgcagggtcttcatcgacgccccgccctccctgcagatcaagatccaggccctc
agcatgttcaacaccacctccacacacaccacatacgtgctgatccgagacgtggacacg
ctgaagacgacggtgttctctggccgccagctgttcctgtggagctccgaggggagcagg
gcggaggtggagttccacggcgactaccagcacatcaagggctccttccacgcgcaatac
tcactcgtccggccctga
DBGET
integrated database retrieval system
