KEGG   Alosa sapidissima (American shad): 121715088
Entry
121715088         CDS       T11137                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    121715088 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asad03400]
    121715088 (xpa)
DNA repair and recombination proteins [BR:asad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121715088 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N eIF-5_eIF-2B RDD1 DUF6236
Other DBs
NCBI-GeneID: 121715088
NCBI-ProteinID: XP_041956408
LinkDB
Position
1:17655177..17661279
AA seq 272 aa
METALAEKASHDLPKTTSEPLSAFMLAKIERNRQRALMLRQARLASRPSSALGEGGTCAK
VAKTVDSGAGFFIEDDDEEDGQIAKKLTQQPAPVIESEYLVCEECSKPFMDSYLSNSFDL
AVCDKCRDNEVKHKLISRTEAKQNYLLKDCDLDKREPPLRFILRKNPHNTHWGDMKLYLK
LQVEMRCMEVWGSEEALEEAKETREENREVQKQKRFNKKVKELRKAVRSSMFRKDTSIHQ
HEYGPEELVDEEEDLYRKTCTSCGHQLTYEKM
NT seq 819 nt   +upstreamnt  +downstreamnt
atggagacggccctggcggaaaaggcatctcatgatctgccaaaaacaacgtccgagcct
ttatcagcttttatgttggctaagatagaacgcaataggcaacgggcactaatgttgaga
caagcacgactggcgagccgaccgtcttcagcattgggagaaggtgggacttgtgcaaaa
gtcgcgaaaacagttgattcgggagcaggctttttcattgaagatgatgatgaagaagac
ggacaaatagcaaagaaactgacccagcagccagctcctgtaatcgaatctgagtatctg
gtgtgtgaggagtgttccaagccattcatggactcttacctgagcaacagttttgattta
gcagtatgtgacaagtgcagggacaatgaggtgaagcacaagctcatctctcgcacagag
gcgaagcagaactacttactgaaggactgtgatctggacaagagggagccaccactacgc
ttcattctcagaaagaacccccacaacactcactggggggacatgaagctgtacctcaag
ctgcaggtggagatgcgctgtatggaggtgtgggggagtgaggaggcgctggaggaggct
aaggagacacgtgaggagaaccgagaggtccagaaacaaaaacgcttcaacaagaaggtc
aaagagctgaggaaggcggtgagaagcagcatgttccggaaggacaccagcatccaccag
catgagtacggccctgaagagctggtggacgaggaggaagacctctacaggaaaacctgc
actagttgtggtcatcagctcacctatgaaaagatgtag

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