Alosa sapidissima (American shad): 121715141
Help
Entry
121715141 CDS
T11137
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121715141 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121715141 (ddx31)
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121715141 (ddx31)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121715141 (ddx31)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
Pre-60S particles
Helicases
121715141 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
121715141
NCBI-ProteinID:
XP_041956486
LinkDB
All DBs
Position
8:complement(34906930..34920838)
Genome browser
AA seq
845 aa
AA seq
DB search
MADQTLMINFSTPEHFKAPKTYRGSFKARDKWAQKKQAAALKRKASGEHPAPPFKHKKPR
HSDQTPDSQPAPLSPKSPQKHNRNSQSEQTSKHQSAPLSQKSPQKHKKHSQSVQTSKHQD
AFPQNHKRHVRSEEASKPDAPLIPKSPPEQKKPPPSNPDQESPGSPGPQTPRWKQPRGGH
GPQGKRSTPQRPSDRKCSDGSGTAAGGKHVIKTSSLFRNNPDIPSVQAPSVTQLKEKVFT
TDSFSELDLHPHLVATLNKVLNVTSMTSVQKQTIPVLLAGKDAVVRSQTGSGKTLAYGIP
IVQSLQAVEPKIKRGDGPLAVIVVPTRELAQQSFQIFQKLLKPFTWIVPGVLMGGEKRKA
EKARLRKGINILVSTPGRLVDHINNTLSIVFSSVRWLILDEADRTLDLGFEKDLAVILNA
LNGGGSPRQNVLLSATLTEGLSRLADICMQDPVSVHVCEDGGSAHVPACEDGHEEAQTAQ
VCEGAEQAERFAVPESLQQHMVVVPSKLRLVCLAAFILAKCKFESGQKLIVFLSSCEAVE
FLLSLLTAVLCGERGDDATPKKTKNKPAPNKPAPKPINFLRLHGNMKQEERMEVFQEFSQ
GKSGVLLCTDVAARGLDLPQVTWIIQYNPPLSAAEYVHRVGRTARIGAEGSSLLFLTPAE
VAYVDVLANHNISLAEMKLEEILSVLMRDERFRGRGRWDHKKGQAAVDQEMRERATVFQT
DFENVVHASEESVQTAKRALQSFVRAYTTYPSALKHIFHLRSLHLGHAAKSFGLRDAPRN
LTQAPGENARKNKIKNKDNKRKPGMSERKRVAHLLCSEFGDGADCSVRKRRRRKGKTTEE
ETLEG
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaaactttgatgatcaacttttcgacccctgaacattttaaagcacccaag
acctatcggggctctttcaaagcgcgtgacaagtgggcacagaaaaagcaggcggctgcc
ttgaaacgcaaggcttcaggagaacaccctgctccaccattcaaacacaagaaacctcgt
cattcagaccagacccctgattcacagccagctcctctcagcccgaaatctccccagaag
cataacaggaactcccaatcagaacagacttccaagcatcagagtgcacccctcagccag
aaatctccccagaagcacaaaaagcattctcagtcagtccagacctccaagcatcaggat
gcatttccccagaaccacaaaaggcatgttcggtcagaggaggcctccaaaccagatgca
cctctcatccccaaatcccctccagaacagaagaaacctcctccgtccaacccggaccag
gaaagccctggatcccccggtcctcagacgccccgttggaagcagccccgcggtgggcat
ggtccgcaggggaagaggagcactcctcagcggccgtcggacaggaagtgcagcgatggc
agtgggacagcagcggggggcaaacacgtcatcaagacttccagcctcttcagaaacaac
cccgacatccccagcgtccaggctcctagtgtgacccagctgaaggaaaaggttttcacc
accgactccttctctgaactggacctgcatccccacctggtggcaacactcaacaaggtc
ctgaatgtgaccagtatgaccagtgtccagaaacagaccattcctgtgctactagcagga
aaagatgcagtggtgcgctctcaaaccggttcagggaagacattagcctatggcattcct
attgtgcagtcgctacaagcagtagaacccaaaattaagcgaggagacgggcccctggct
gtgattgtggtccctactagagagctggcccaacagagcttccagatcttccagaagctt
ctaaagccattcacatggattgttccaggagtgttgatgggaggggagaagaggaaagca
gagaaagccagactgaggaaaggcatcaacatcctggtgtccactcctggacgactggtt
gaccacataaacaacacactcagcattgtcttcagcagtgtgcgctggctcatcctcgac
gaagctgaccggactctggatctgggctttgagaaggacctggcggtcatcttaaatgcc
ctcaatggtggaggttcccccaggcagaatgtgctgctctctgctacactcaccgaggga
ttgtctcgtctggctgacatctgcatgcaggaccccgtgagcgtgcacgtgtgtgaggat
ggcgggagcgcgcacgtgcccgcgtgtgaggatggacacgaggaggcccagactgcccag
gtgtgtgagggtgcggagcaggccgagaggttcgccgtgcccgagagcctgcagcagcac
atggtggtcgtccccagcaagctgcgcctggtctgcctcgccgccttcatcctggccaag
tgcaagtttgagagtgggcagaagctgatcgtgttcttgtcgagctgtgaggcggtggag
tttctgctgtcgctcctcacggctgttctgtgtggagaacgaggcgacgacgccacgccc
aaaaagaccaaaaacaaacccgcccccaacaaacccgcccccaaacccatcaacttcctg
cgactgcatgggaacatgaaacaagaggagaggatggaggtgttccaggagttctcccag
ggcaagagtggagttctgctctgtaccgatgttgcagctcggggactcgaccttcctcag
gtgacctggatcatacagtacaaccctcccctctcggctgccgagtacgtccatcgtgtg
ggccgcacagcgcgtatcggcgccgaaggctccagcctcctcttcctcactccagcagag
gtggcctacgtggacgtcctggccaatcacaacatcagcttggctgagatgaaactggag
gagattttgtcggtactgatgagagatgagcggttccgtggccgaggacgttgggatcat
aagaagggtcaggcggctgttgaccaggagatgcgggagagagccacagtgttccagacg
gactttgagaatgtcgtccacgccagcgaggagtctgtccagactgccaaacgagcgttg
cagtcgtttgtgcgggcctacaccacctacccctccgccctgaagcacatcttccacctg
cggagcctccatctgggccacgcggccaagagcttcggcctgagagacgccccacggaac
ctgacccaggcccccggagagaatgcacgcaagaacaagatcaagaacaaagacaacaag
cggaagccaggcatgagtgagcgtaagcgtgtggctcatctgctgtgctctgagtttggg
gacggagctgactgcagcgtccggaagaggaggaggaggaaaggaaagaccacagaggag
gagacgctggagggatga
DBGET
integrated database retrieval system
