Alosa sapidissima (American shad): 121715249
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Entry
121715249 CDS
T11137
Symbol
rufy3
Name
(RefSeq) protein RUFY3 isoform X1
KO
K24776
RUN and FYVE domain-containing protein 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121715249 (rufy3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121715249 (rufy3)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Arf GTPases and associated proteins
Other Arf associated proteins
121715249 (rufy3)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121715249 (rufy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
PPP1R21_C
Trimer_CC
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
121715249
NCBI-ProteinID:
XP_041956670
LinkDB
All DBs
Position
8:complement(11690210..11711803)
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AA seq
687 aa
AA seq
DB search
MADHATEPSGNDDSEVSQTLGDLGSGHSEENNGHCTSSPEESFSPTSVIYFKEALSAANI
QFKKGSPNPNVTPVQYDFHIERTKKTKNSWEDFTDLVEQMRLLDEFKDPKDPIAIERLNL
MNMAKLSIKGLIESALNLGRTLDSDYAPLQQFFVVMEHCLKHGLKSKKTFLGQNKSFWGP
LELVEKLTPEAGEITASVKDLPGLKTPLGRGRAWLRLALMQKKLSDYMKTIINRKDLLSE
FYEANALMMEEEGAVIAGLLVGLNVIDANLCMKGEDLDSQVGVIDFSMYLKDGGHSSKST
EGDGQITAILDQKNYVEELNRHLSASVNNLQAKVDALEKSNSKLTEELAVANNRVITLQE
EVERIKIEGFYPADKVPRADGSAEGQVLGEARKQLKEETQLRLDVERELEVQIGMKQEME
LSMKMLEKDICEKHDALVELRQQLDDLRTLNHELQHKSQSAESGSKQKTEIISRLEEKTN
QMAGTIKQLETRSKQAERQRDLAEEANRLFKQEFGDKIESLQEELEQLRKQKSSLEGELK
RQREPRGGQHHDNGSGDKRSSVASNKDSRQQVEDIRKELESVRKENDTLRTVLEEKSSLS
SSLSLSQNEEEDVQEQSLFEDLEPFICTMCEKEDSLTRTKKQCKNCRGLFCESCLANELP
LPSSINPEQVCDSCYSQLLQQYASSPP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccatgccactgaaccgtcggggaatgatgattcagaagtttcccaaactttg
ggggatttaggaagtggacattcagaggaaaataacggacattgcaccagtagtcctgaa
gaatcattctcgccgacatcggtgatatattttaaagaggctttaagcgctgccaacatt
cagttcaaaaaagggtcgcctaatcctaacgttacaccagtccaatatgattttcacatc
gaacgaacaaagaagaccaaaaactcatgggaggatttcacagatttggtggaacaaatg
cgcttgcttgatgagtttaaagatcccaaggaccctatcgccatcgagaggctcaacctg
atgaacatggctaagctgagcatcaagggcctgattgagtcggcgttaaacctgggtcgg
acgttggactccgactacgccccgctccagcagttctttgtggtgatggagcactgcctc
aaacatggacttaaaagtaagaagaccttcctgggacagaacaagtcattttggggtccg
ctggagctggtggagaagctgacacctgaagctggagaaatcacagccagcgtgaaagac
ctgcctggactcaagaccccgctgggcagagggcgcgcttggctaaggctggccctcatg
cagaagaagctgtccgactacatgaagaccatcatcaacaggaaggacctgctaagtgag
ttctatgaggccaatgctctgatgatggaggaggaaggagcagtgatcgctgggctgctg
gtgggcttgaacgtgatcgacgccaacctctgcatgaagggagaagatctggactcacag
gtgggggttatagatttctcaatgtatctgaaggatggcggccacagtagcaagagcaca
gaaggtgatggacaaataacagccattctagaccagaagaattatgtggaggagctgaac
agacatctaagtgcgtcagtcaacaacctccaggccaaagtagacgccttggagaagtcc
aactccaaactcacagaagagttggcggtagcaaataatcgtgtgatcaccttacaagag
gaagtggagcggatcaagatcgagggcttctatcctgcagacaaggtccccagagcggat
ggcagtgcagagggccaggtgctgggggaagctcgcaagcagctcaaggaggaaacccaa
ctaagactggatgtggagcgggagctagaggtgcagatcggcatgaagcaggagatggag
ctgtccatgaagatgctggagaaggacatctgcgagaagcacgacgccctggtggagctg
cgccagcagctggatgacctgcggacgctcaaccacgagctgcagcacaagtcgcagagt
gcagagtccggctccaaacagaagaccgagatcatcagtcgcctggaggagaagaccaac
cagatggccggcaccatcaaacagctggagaccagatccaagcaggcggagcggcagagg
gacctggcggaggaggccaaccgcctcttcaagcaggagttcggggacaagattgagagc
ttgcaggaggagctagaacagctgaggaagcagaaatccagcttggagggagagctgaag
aggcagagggagcctcgtggaggccagcaccatgacaacggctcgggggacaaaaggagc
tccgtggcctctaacaaagacagcaggcagcaggtggaggacataagaaaggagctggag
tcggtcagaaaagagaatgacactctacgcactgtgctggaggagaaatcgagtctcagt
tccagcttgtccctatcacaaaatgaggaagaggatgtgcaggaacagtccttattcgag
gaccttgagcccttcatctgcacaatgtgtgaaaaagaagactccttgaccaggaccaag
aagcagtgcaagaactgcagagggctcttctgcgagagctgcctggccaacgagttaccc
ctgccctcctccatcaaccctgaacaggtctgcgactcctgctactcccagcttttgcaa
cagtatgcatcgagcccaccctga
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