Alosa sapidissima (American shad): 121715256
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Entry
121715256 CDS
T11137
Symbol
c8a
Name
(RefSeq) complement component C8 alpha chain
KO
K03997
complement component 8 subunit alpha
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121715256 (c8a)
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Gene cluster
GFIT
Motif
Pfam:
MACPF
EGF_C8A_B_C6
Ldl_recept_a
TSP1_spondin
TSP_1
SNAD4
APOBEC3
APOBEC1
Motif
Other DBs
NCBI-GeneID:
121715256
NCBI-ProteinID:
XP_041956698
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Position
1:49257028..49261815
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AA seq
599 aa
AA seq
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MKIAVCFLVFWLNQFFTSGTIIWGQHGAVRAINDTMRKARSVNLPAPIDCRLTPWSSWSP
CGACQTKAFRFRSLDKPSQFGGTECQESQWDEKFCPSGAVCPLQNQCGEMFSCKQTGRCI
SQHLRCNGEMDCQDGTDEEECEDVDVRDNKCLNLFPIPGSERATQGYNVLTGDFALHVLD
PVYYGGICEYVYNGEWRKLTYDAYCENLYYNDDEKYYRTPYNFHSYRFVAQARSEASSEY
FEDVSSFLNGRKTLDSYKWGLTVGITKKGFGGELGISGNKESRFLHNISQYASQDVGVVR
LVSTVQTAQFKMRSRDLVLEENILQSLMELPEEYDFGSYAQFFQEYGTHHITRGTMGGTL
EHVMIVNKEAMRKSEVHSKMVQKCLGLSFKLKLPTDALRDNPVKGNITFCNKIGEVTQSR
GSSDSLINDGFTLVKGGTDPAAAGAKIIEDTSALKKWGKSLKYSPDLIDFETLPMYELVR
LSTAADQARTRLPHLRRAWEEYLQQYSPCRCAPCRNNGVPALSGTSCSCVCKSGYGGEAC
EELQRPDAPKQDSVDGSWSCWGSWSSCQSGRKTRRRECNNPKPAGGAPYLGNSEQTQPC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcagtttgttttttagtattttggctgaatcagtttttcacaagtgggacc
attatttggggacaacatggtgcggtcagggctataaatgacacaatgagaaaagccaga
agtgtgaacctgccagcaccaattgactgcaggctaacgccatggtcatcttggtcaccc
tgtggtgcttgccagacaaaagcgtttcgattcaggtccctagacaagccatcccagttt
ggggggacggagtgtcaggaaagccagtgggatgagaagttctgtccatcaggagcagtg
tgtccactgcagaaccagtgtggggaaatgttttcctgcaagcagacagggaggtgtata
agtcagcatctccgctgtaatggagagatggactgtcaggatggaacggatgaagaggag
tgtgaggatgtggatgtgagggataacaaatgcttgaacctcttccccatccccggctct
gaacgagccactcaaggctacaatgtgttgactggagattttgcactgcacgtcttggac
ccagtatactatggcgggatctgtgaatatgtctacaatggagaatggaggaaactcaca
tatgatgcttattgtgagaatctttattataatgatgatgaaaagtactaccggacacca
tataatttccattcatatcgatttgtggcgcaggcaagatcggaagcctcctcagagtac
tttgaggacgtgtcaagttttctcaatggccggaaaactttggattcttataaatgggga
ctcactgtaggaataaccaaaaaagggttcggtggagagttaggcatttcagggaataag
gagtctcggttcctccacaacatatcacagtacgcaagtcaggatgtgggtgtggtgaga
cttgtgtccactgtgcagacagcccagtttaagatgcggagcagggacttggttttggaa
gagaacatactgcagtctcttatggagctgccggaggagtacgacttcggctcgtatgcc
cagtttttccaggagtacggcacccaccacatcacccgtggcaccatggggggaacgctg
gagcatgtgatgattgtcaacaaagaggccatgaggaaatctgaggtgcattccaaaatg
gtccaaaaatgccttgggttgtcctttaaactgaagttaccgacagatgctttacgtgac
aacccagtgaaggggaacatcaccttttgtaataagataggcgaagtgactcagagccgt
gggtcatctgatagtttaatcaatgatgggttcacactggttaaagggggaacggatcct
gccgcagcaggcgccaagatcatcgaagacacaagcgctctcaagaagtggggcaaatct
ctcaaatacagtcctgatcttattgactttgagaccttacctatgtatgagcttgtgcgc
ctgagcactgcagccgaccaggccaggaccagacttccgcatctgaggagggcctgggag
gagtacctacagcagtatagcccgtgccgctgcgccccctgcaggaataacggtgtccct
gcactcagcggcacctcctgcagctgtgtgtgcaagtcgggctatgggggagaagcctgt
gaggagcttcagagaccagatgctcccaagcaagattctgttgatggctcctggagttgc
tggggcagctggtcctcatgccaatcaggccgaaagacccggagacgagagtgtaacaat
cccaaaccagcagggggagccccatatctcggtaactctgagcaaacccaaccctgctga
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