Alosa sapidissima (American shad): 121715286
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Entry
121715286 CDS
T11137
Symbol
si:ch211-166a6.5
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
asad03012
]
121715286 (si:ch211-166a6.5)
Translation factors [BR:
asad03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121715286 (si:ch211-166a6.5)
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GFIT
Other DBs
NCBI-GeneID:
121715286
NCBI-ProteinID:
XP_041956781
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Position
8:complement(18804014..18825117)
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AA seq
1377 aa
AA seq
DB search
MKDNGKKGGRGQGVPDGQAATNGKNAAEVKQEDDGSFSVKIQGPGVEPFELQVHGFWLVQ
DVVLAALGRDEVAPRTSLSLALSGVMLDPLMPLQQVKGLKPGATLRLVEEPYSPRSARAH
LARVQDLLRAAGPHDSLKDGRSPSILSTLTHTHTTDAPPAGHSSKSQKRPASNTKTDQPG
QETGPPEYILPGAAERPPLATLLPADPHSEVPSCLLDLSLSCWNPPPGPRKLQGDFLYIT
VHTREGRHYDITSCPRGFFLNRSTAEVFDPRPSTSSSVCHCLTDLLSQISSEFKQNLTAL
RNRNQRPAEEALASPYRVLSWLGPASATRSHRHAYSSPLAIQEHIIPETPDWNEELQAAR
DLPQRSLEERLQRDRAIQQVNSAFVWAATQGAETVIDGCVDPINGAMDEPAFLWSGVFLS
QGGAAAAHLGGERGKRAAQRLELRAVQAYSQLEGDLQGLHTLPTAVVDYRGVRLSAQGLA
PGSQGSEAGAPRGLLYGFAAGPLENPLRRKLLELLAQSAKGLSLQRHAVIGPNGHQVPLF
TSVDAQGLLGADGRYYVLDVFRTMPADANYQPAEEDQNGEGDGKAEGVQAAATSDLKEPC
RFPHALCRLRPELVKAFIQHKNIQFTQRVRERMEENGGVEECVKPGDPRGAEAVRGACKD
VGSISDIIFEMRFNPNVFTPGVEFASSETAAIELQKKLLKEASSFILTHQIPALLEDCLH
CHEMPIDSAALCRVLHERGINLRYLGQLTTAINKSGDKDRLRHIRRLAYVEIVLRSAKRL
FNNFLQSVEVSSLSAAVSHFLCCLLLPHHGSASAGEEPKKRSRRRGRGGGGASDSTAWST
LSGNELWSLIGQDAKATYGLTEGLGTNADHLVEQYGVQKMSLLREFCLKTGVQLRLRDYV
LDNRNKAPIGPDDVYNILPVVKHLTMTTQDASRLFRAAQGYLQKGQLDRGYEQLKEAAYL
FGRVCDDLHPEACSCLSLLAKAAYLQGRPTEARSVQLRVVVISERVLGFDHPNTIKQYAL
LAVYVYCGGEVALAQRCLYRARLLMLLVHGEDHPYIATLDSSLGLVLQGPQSIQYLQNAL
KINSSFRGDMDVKTALNHHLLAQKMCVAGDYRAAMTHEREAQTVFKNKCGEDHPQTKCSA
DFLTAITQQAVRVERSLRQGGSELSDFTTPETLAPSTDTTLEQLALVNGILKTSYRYEKL
LQMKEKLREKKALEEATETKSETPETANGQPEEQSANDGEVAEGETTPSPDERANGQLNS
TANAESPILNGNCSASDTDEEGGATRNEDLSKLTNGEVHSTAASNQSEEAEPKVNGVSGS
HEEEDNTKDGALTAVSKSGSKVGVSVVTDSQSEATMINGRDSIMANGEVTPALQNSE
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaacggcaagaaaggtggacgaggacagggagtcccagatgggcaagcagca
accaatgggaagaatgctgccgaggtgaaacaggaagacgacggctcattttctgtgaag
attcagggccctggagttgaaccttttgaactgcaggtgcacgggttctggctggtccag
gacgtggtgctggcagctctgggccgtgatgaggtggctccacgcacctccctctctctg
gccctctcgggcgttatgctggaccctctgatgccactgcagcaggtcaaaggcctcaag
ccaggggccaccctacgcctggtggaagagccctattccccgcgttctgcacgtgctcac
ctggcgagggtacaggatctcctgagagcagcaggacctcatgactccctaaaagacggc
agatcccccagcattctcagcacactcacacacacacacaccacagatgctccccctgct
ggacactcctctaagagccagaagcgcccagccagcaacaccaaaacagatcagcctggc
caggagaccggccctccagagtacatcctgcctggagctgcagagcgccccccactggct
actctgctgcccgcagacccacacagtgaggttccgagctgtttgttggacctgtcactc
agctgttggaacccgccccctggccccaggaaactgcagggcgactttttgtacatcact
gtacacacacgggaggggcggcactatgatatcacttcctgtcctcgtggcttcttcctc
aacaggtctacagctgaggtgttcgacccacgtccctccacttcctcttctgtctgccac
tgcctcacggacctgctgagtcaaatcagctccgagtttaaacagaatctcactgcgctg
agaaacagaaaccagcgtccagctgaggaggcactggcgtctccgtaccgggtgttgagc
tggctgggtcctgcctctgctacacgctcgcacagacatgcctacagcagcccactggcc
atacaggaacacatcattccagagactccagattggaatgaggaactgcaggcagccaga
gatctgccccagaggtccttggaggagagactgcagagagacagagccattcaacaggtc
aacagcgcctttgtatgggcagccacacagggagcagagactgtgattgacggctgtgtg
gacccaatcaacggcgccatggacgagccggccttcctgtggagtggtgtgtttctgagc
cagggcggggcagccgctgcccatctaggaggggagagggggaagagggccgcccagcgt
ctggagctcagggctgttcaggcctacagccagctggaaggggatctccagggtctccac
acgctccccacagcggtggtggactaccgtggggtgcgtctctccgcgcagggcctggcc
cccggctcgcagggctcagaggccggggcccctcggggcctcctgtatggtttcgctgcg
ggccccctggagaacccactccgcaggaagctcttggagctcctggcccagtcggccaag
ggcctgtccctgcagaggcacgccgtcattggccccaacgggcaccaggtgcccctcttc
acctccgtggatgcccaagggctgctgggggccgacgggcgctactacgtgctcgatgtg
ttccgcaccatgcctgccgacgccaactaccagcctgcagaggaggaccagaacggagaa
ggggatggcaaggctgagggtgttcaagcagcggcgacctctgacctcaaagagccatgc
aggttccctcacgctctctgccgcctgaggcctgagctggtcaaagccttcatccagcac
aaaaacatccagttcacgcaacgagtcagagaaaggatggaggagaacggaggagtagag
gaatgtgtgaaacctggtgacccgcgaggggcagaagcagtaagaggggcatgcaaagat
gtgggctccatcagtgacatcatctttgagatgcgcttcaaccccaatgttttcactcca
ggagttgagtttgccagctctgagacggcagcgatcgagctgcagaagaaattgttgaag
gaagccagctcattcattctcacacatcagataccagcactgttggaagactgtttgcac
tgccacgagatgccaatagatagtgctgctctctgccgtgtcctgcatgagagaggaatc
aacctgcggtacctgggtcagctgaccacagccatcaacaaatcaggagacaaggatcgt
cttcggcacataagaagattggcatatgttgagattgtcttgcggtcagccaaaagactt
ttcaacaacttcttacagtctgtggaggtgtcaagtctgtcagcagctgtcagtcatttc
ctctgctgtctgttgctgccacaccatggctccgcctctgctggggaggagcctaagaag
cgctccaggaggcgaggccgtggagggggaggggcttccgacagcactgcctggagcaca
ctcagtgggaacgaactgtggagcctgattggtcaggacgccaaagcaacctatggtctt
acagagggcttgggtaccaatgctgaccacctggtggagcaatatggagtgcagaagatg
tctctactgagggagttctgtctgaagaccggcgtacagctgcgactcagagactatgtc
cttgataaccgtaacaaggcgcccatcggacctgacgacgtgtacaacatcctacctgtg
gtgaaacacctcaccatgacgacccaggatgcctcacggctatttcgtgctgcccagggt
tacctgcagaaaggccagctggacagggggtatgagcagctgaaggaggcggcctatctg
tttggtcgtgtgtgtgatgaccttcacccggaggcctgtagctgtctcagtctgctggcc
aaagcagcctacctacagggccggcccacggaggctcgtagtgttcaactgagggtggtg
gtgatcagtgagagagtgctgggcttcgaccaccccaacaccatcaagcagtatgctctg
ttggcggtgtatgtgtactgtggcggtgaggtggccttggcacagcggtgtctgtaccgc
gctcgtctcctcatgctgctggtgcacggagaagaccacccctacatcgccaccctggat
agttccctgggattagtgttacagggaccacagtccatccagtacctgcagaatgccctc
aaaatcaactcctccttcaggggagacatggatgtcaagactgccctcaatcaccatctg
ctggcccagaagatgtgtgtagctggagactacagggcagccatgacccacgagagggaa
gcccagacagtgtttaagaacaagtgtggcgaggaccatccccagaccaaatgcagtgct
gatttcctgacagcaattacccagcaggctgtgcgtgtggagcgctcccttcgtcaggga
ggatcggagctctctgactttaccacacctgagactttggcgccctctacagacacaaca
ctcgaacagctggctctggtcaatggcatcctcaagacctcctacaggtatgagaaactt
cttcagatgaaagaaaaactgagagaaaagaaggcattggaggaagccacagagacaaaa
tctgaaaccccagaaacagccaatggacaacctgaagaacaatcggccaatgatggagag
gttgccgagggtgaaaccactccctcacctgatgagagagctaacggtcagttgaattct
actgctaacgctgagtcacccatcctcaatggaaactgctcagcaagtgacacagacgag
gaaggaggagccacaaggaatgaggacctatcaaaattgaccaatggtgaagtgcactcc
acagcagccagtaaccaatcagaagaggcagagccaaaagttaacggggtgtctggatct
cacgaggaagaagacaacacaaaagatggagccctgactgctgtgagcaaatcagggtca
aaggttggtgtctccgtggtgacggattcccaatctgaagccaccatgatcaatggaaga
gacagcatcatggccaacggtgaagtgacgccagcactgcaaaattctgagtga
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