Alosa sapidissima (American shad): 121715389
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Entry
121715389 CDS
T11137
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121715389 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121715389 (nipbla)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
121715389 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd3
Cnd1
RIX1
ARM_ECM29
MIF4G
Motif
Other DBs
NCBI-GeneID:
121715389
NCBI-ProteinID:
XP_041957003
LinkDB
All DBs
Position
8:19972912..19998935
Genome browser
AA seq
2232 aa
AA seq
DB search
MNGDTPHVPITTVAGITSLTDLLNQLPLPSPHPATTTKSLLYNGSIAEKVSCLLACQDEN
LVAQLSQSLSQVSTEHIELKNNLGRDDLEGDMPVLLQIVLSRSPNIFREKNMPIQYGTPD
GTRQPMTPQYNVTQNAMQNSPATSNYQPASMAQSPTSGFVPQQTGPGSRFPQNSHVSSPY
TPQSPAPYMQYPHPSGYNQQQQMQQVSVLSPTIPGGMRNIHENQERDQSLRNPSLPLRSP
QAVCSPPDRDGIPKAASRPPLIMQSPPQYSSPQDGLPDLLLNSPDHKQKRGKVTQGERRQ
ADKAATYDFMASEDELPFNAGKAGQGLMPGEPVQEKDKPLKKRRPDPHPQDPGAVEDQLG
TQMAPQEAGAADHGTTRQHSHSDAQRLQEQSQQGPGVSSSSRLRQSGSQRNIPEGERDRK
EDQGTQQRDIVKGSAPVVVLQKLSHEEVQKLIKEKHKSPRSSHKHHHHSERSSRDMQAGM
DSSAADRVKLGKRRRGATNDRPRYAEVSSGDDSEPERDSVRKRQRKDNDRAWEYEEPESR
RGISSRSRYGDRSPDSSDRDSPPPPSLSDVARSLQKKEKQKKRKAYEPKLTPEEMMESST
FKRFIASLDSILENLEDVDFSIQDDDEIPQELLLGKQQLSELASESAKIKAMGITCKIPS
ERLVKVLSMLEKNIQDGGNLSTLMNPENDTEDEERLWRDLIMERVTKSADACLTALNIMT
SPHMPKAVYIEDVIERTLQYTKFHLQNTLYPQYDPVYRVDPQGGGLLTSRAKRARCSTSK
QRVIIMLYNKVCDVVSSISELVDIQLLTDTTILQVSSMGITPFFVENISELQLCAIKLVT
VVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDADGESVHIQMVTALVLQLIH
CVVHLPSDQDSIEESKMDEDVLINTSYETARRTAQNFLSVFLKKCGSKQGEEDYRPLFEN
FVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDA
ITSNMDQRTIDRILKETSGNDEIQQLQKALLDHLEENAETAPALIFARKFYIAQWFRDST
TEAEKAMKKGQEKEKDEDATEGRRHAKELKSTGEIMQRAEARKKFLRNIIKTTPAQFNTL
RMNSDTVDYDDAGLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVA
VDPSILARKDMQNGVHGRLMDSSTSVREAAVELLGRFVLSRPQLTEQYYDMLIKRILDTG
ISVRKRVIKILRDICLEQPTFSKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPGN
DKEAMNRKILNITDVVAACQDSGYDWFEQLLQNLLKSEEDSSYKPTRKACVQLVDSLVDH
ILRYEESLSEHKNVNSTRLVACITTLYLFSKVKADFMVKHAMTMQPYLTTKCNSTNDFMV
ICNVAKILELVVPLMEHPSESFLTTIEEDLMKLIIKYGMLVVQHCVSCLGAVVNKVTHNY
KFVWACFNRYYGVLTKLKVHHQQDSNHSITDAKRPILMRSLFTVGALCRHFDFDLERFKG
SSQIVIKEKVLELLLYFINNEDEEVQVKAIIGLGNLLIMHPSQMFIPEVKRLYNGLLSDV
KSPVNLKIQVLKNLQMYLQEEDMRMLEADREWNKLSKQEDLKEMGDITSGMSSSIMQLYL
KQVLEAFFHTQSNVRHFALSVIALTLNQGLIHPVQCVPYLIAMGTDTEPTMRNKADQQIV
EIDKKYSGFIHMKAAAGMKMSYQVQEAIMAQRKGIIRGFRQEESISALCAQLYSMVRSNR
QHRRAFLISLLNLFDDTSKVEVNMLLFVADNLAYFPYQSQEEPLFIMHHIDIRLSVSGSN
LLQTFKESLRKPGQPEKKEKERQANSTAWDVDVSEEELDNPDVDVDNDGTKEKPPEEEQQ
EEPPPPPPVDKKADAESESDSDLEDVDVVMERLPEDTMPLMEFARASQGILLLLVLKQHL
KALYGFSDGKILKYSPTESAKVYDKAVNRKANIHFNPRQTLEFLSNNVANAELTFELKKR
IVQQFLDFKLLMDHLDPDEDEEGEGETGANARNKAINALLGGSGPSAGPAHSPRNHAADT
EEDDSDTEDRTPGARKAKRGGDSGEAVGNMSESVEPSDLVAFLRPQYKDRPQIARVIQRT
ADGYSIRWLSGSYNSPWTEAKRREGRKQVPWLDTIKESDIIYKKLPLTASNKLTHKVAQT
LRALYASKATSS
NT seq
6699 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatacgccccatgtccccatcaccactgtagcaggaatcactagtctcaca
gacttgttgaaccaactgccccttccctccccacaccctgctaccaccactaagagctta
ctgtacaatggcagcattgctgagaaggtcagctgtcttctggcttgccaggatgagaat
ctggtggctcagctgtctcagagtctcagccaggtgtccactgaacacatagaactgaag
aacaacctgggcagagatgacttggaaggtgatatgccagtcctgctacagattgttctg
tccaggagccccaatatcttcagggaaaaaaatatgccaattcaatatgggactccagat
ggcacaaggcagcctatgacgccacaatataatgtaacccagaatgccatgcagaacagc
ccagccacatcaaattaccagcctgcttccatggcacagagcccaacaagtgggtttgtc
ccccagcagacgggtccgggcagcaggtttccccagaacagccatgtgtccagcccctac
acacctcagagcccagccccgtacatgcagtaccctcatccatctggctacaatcagcag
caacagatgcagcaagtgtctgtactgagccctacaatccctggtggcatgaggaacatt
catgaaaatcaggagagggaccagtccttaagaaacccctcacttcctttaaggtcacca
caggcagtgtgctcaccaccagacagagatggaattcccaaagctgcctcccgcccaccg
cttataatgcagtcacctccgcaatactcctcacctcaagatggcttaccagacctcctg
ctcaactcccctgaccacaagcagaagagaggcaaggtgacccaaggtgaacgcaggcaa
gctgataaggctgccacctacgactttatggcctcagaagatgagctgccgttcaatgca
gggaaggcaggccagggactcatgccaggagagccagtacaggaaaaagacaaaccgctt
aaaaagcggagaccggaccctcaccctcaggaccctggagcggtggaggaccaactcggc
acccagatggcccctcaggaggctggcgcggctgatcacggcaccactcgacagcactcc
cactcggatgcccagaggttgcaggaacagtcccagcagggcccgggagtctccagctcg
agtagactccggcagtcggggtcacagaggaacattccggaaggggagagagacaggaaa
gaggaccaaggaacgcagcagagggacattgtcaagggctctgcacccgtggtggtgctc
cagaagctgtcccacgaggaggtgcagaagctgattaaggagaagcacaagagccccaga
agctcacacaagcaccatcaccactcagagcgctccagcagagacatgcaggcagggatg
gactccagcgctgctgacagggtgaagcttggcaagcgcagacgaggcgcaaccaatgac
agacccagatatgcagaggtcagctctggagatgacagcgaacccgagcgagactctgtg
aggaagcgccagaggaaggacaatgacagagcctgggagtacgaggaacccgagtccagg
agaggcataagctcacgcagtcgctatggagaccgcagccctgactcctccgaccgggac
tcaccgcctcctcccagcctgagtgatgttgcaaggagtctccagaagaaagagaagcag
aagaaaagaaaggcatatgagcccaagctcacaccagaagaaatgatggagtcatccacc
tttaagaggttcattgccagtctggacagcattctagaaaaccttgaggacgttgacttc
tctatacaggatgatgatgaaattccacaggagttgcttctgggcaaacagcagctgagt
gagctagccagtgagtcagccaagatcaaagccatgggcatcacctgcaagattccatct
gagagactggtgaaggtgttgagcatgttggagaagaacattcaggatgggggcaatctc
tctaccttgatgaaccctgagaacgacacggaggatgaggagcgcctgtggcgggacctt
atcatggagcgcgtcaccaaatcagcggacgcgtgcctgacggcgctcaacatcatgacg
tcgccgcacatgcccaaggccgtctacatcgaggacgtgattgagaggaccctgcagtac
accaagttccacctgcagaacacgctctacccccagtacgaccctgtgtaccgggtggac
cctcagggaggaggtctgttgacttccagagccaagcgggcgaggtgctcgacgagcaag
cagagagtcatcatcatgctctacaacaaagtgtgcgacgttgtgagcagcatctctgag
ttggttgatatccaactgttgacagacaccacaatcctgcaggtgtcctccatgggcatc
acgcccttctttgtggaaaatatcagtgagctgcagctgtgtgccatcaagctggtgacc
gtggtgttctcccgctacgagaagcacagacagctgatcctggaggagatcttcacctct
ctggccagactgcccaccagcaagcgcagcctcaggaacttcaggctgaacagcagcgac
gcggacggtgagtccgtgcacatccagatggtgacggccctggtgctgcagctcatccac
tgcgtggtccatctgccctctgaccaggactccattgaggagagtaagatggatgaggat
gttctcatcaacacctcctatgagacagccaggaggacagcccagaactttctctctgtg
ttcctcaagaagtgtgggagcaagcagggggaggaggactaccggccactgtttgagaac
tttgtgcaggatctgctgtccaccgtcaacaagcccgagtggccagcagccgagctgcta
ctcagtctgctggggagactactggtccaccagttcagtaataagcagacagagatggct
ctcagggtggcctcgctggactacctgggcaccgtggcggccaggctccgcaaagacgca
atcaccagcaacatggaccaacgcaccatagaccgcatcctcaaagagacctcaggtaat
gatgagatccagcagctccagaaggctctgctcgatcatctggaagagaatgcagagact
gcacctgcactgatttttgcgcgtaagttctacatagcgcaatggttcagggactccacc
acggaggcggagaaggcgatgaagaagggccaggagaaggagaaggacgaggacgccacg
gagggtcggcgtcacgccaaggagctcaagagcactggggagatcatgcagcgggccgag
gcccgcaagaagttcctgcgcaacataatcaagaccactcctgcccagtttaatacactc
agaatgaactcagacactgtggactatgatgatgcgggcttgattgtgcgctacctagcc
tctatgaggccattcgcacaaagctttgacatctacctgacccagatcctgagggtcctg
ggcgagagtgccatagccgtcaggactaaagccatgaaatgtctgtccgaggtggtggcc
gtggaccccagcatactggcacggaaggacatgcagaacggggttcacgggcgtctgatg
gactcgtccaccagcgtgcgggaggctgcagtggagctgctgggccgcttcgtgctgagc
cgcccccagctcacagagcagtactacgacatgctcatcaagaggatactggacacgggc
atcagtgtgaggaagagggtgattaagatcctcagagacatctgcctggagcagcccacc
ttcagcaagatcaccgagatgtgtgtgaagatgatccgcagggtcaatgacgaagagggc
atcaagaaactggtcaatgagacattccagaagttgtggttcaccccaactccaggcaac
gacaaagaggccatgaacaggaagattctgaacatcacagatgtggttgctgcttgccaa
gacagtggttacgactggtttgaacagcttctgcagaatctgctgaagtctgaggaggat
tcctcctacaagcccaccaggaaggcctgtgtgcagctggttgacagtctagtggatcac
atcctgcgctatgaggagtccctctcagagcataagaatgtgaactccactcggcttgtc
gcctgcatcaccaccctctatctgttcagtaaagtcaaggccgacttcatggtcaaacat
gccatgactatgcagccctacctgaccaccaagtgtaactccacgaatgacttcatggtg
atctgcaacgtggcgaagatcttggagctggtggtgcctctgatggagcatccaagtgag
agcttcctgaccacaattgaggaggacctgatgaagctcatcatcaaatatggcatgctg
gtggtccaacactgtgtgagctgccttggtgcagtggtcaacaaagtgacacacaactac
aagtttgtttgggcttgttttaatcgatactacggtgtcctgaccaagctaaaggtccat
caccagcaggactccaaccactccataacggacgccaagcgtccgatcctgatgcgctcc
ctcttcactgtgggcgctctgtgtcgccacttcgactttgacctggagcgcttcaagggc
agcagccaaattgttatcaaagagaaggttctggaactccttctgtacttcataaacaat
gaggatgaggaagtgcaagtgaaagccatcattggtttaggcaacctgctcatcatgcac
cccagccagatgttcattcccgaggtgaagcgcctctacaacgggctattgtctgacgtg
aagagcccggtgaacctgaagatccaggtgctgaagaacctgcagatgtatctgcaggag
gaagacatgcgcatgctggaggctgacagggagtggaacaagctgtccaagcaggaggac
ctgaaggagatgggcgacatcacgtcgggcatgagcagctccatcatgcagctctatctg
aagcaggtgctggaggccttcttccacacacagtccaacgtgcgtcacttcgccctcagc
gtcatcgccctcactctcaaccaaggccttatccaccctgtgcagtgtgttccgtacctt
attgcaatgggaacagacacagagccaactatgaggaacaaggcagaccagcagatagtg
gagattgacaagaaatacagcggattcattcacatgaaggctgcggccgggatgaagatg
tcctaccaggtgcaggaggccatcatggcccagcgtaagggcatcatccggggcttccgt
caggaggagtccatcagcgcgctgtgtgcgcagctctactccatggtgcgcagcaacagg
cagcaccgccgcgccttcctcatctcgctcctcaacctgttcgatgacacctcgaaggtg
gaggtgaacatgctgctgtttgtggccgacaacctggcctacttcccctaccagagccag
gaggagccgctcttcatcatgcaccacatcgacatcaggctgtccgtgtctggcagcaat
ctgctgcagaccttcaaagagtcgttgcggaagcccggtcagccggagaagaaagaaaag
gagcgacaggccaatagcaccgcgtgggacgtggacgtgagcgaggaggagctggacaac
cctgacgtcgatgtggacaacgacggcacaaaggagaagcctccagaggaggagcagcag
gaggagccgccgccgccgccgcccgtcgacaagaaagccgacgccgagtcggagtccgac
tccgacttggaggacgtggacgtggtgatggagcggctgccggaggacaccatgcccctg
atggagttcgcccgcgcctcgcagggcatcctgctgctgctggtcctcaagcagcacctc
aaagctctctacggcttttcagacggcaaaatcctcaagtactcccccacagagtcagcg
aaggtatacgacaaggctgtcaatcggaaggcaaatattcacttcaaccctcgccagacc
ctcgagttcctgtccaacaatgtagccaacgctgagctcactttcgagctcaagaagagg
atcgtccagcagttcctcgactttaagttgctgatggaccacctggacccagatgaagat
gaagagggagaaggagagacaggtgctaacgcccggaacaaagccatcaacgccctgctg
ggggggtctggccccagtgctggcccggctcacagcccccggaatcacgcagcggacacg
gaggaggatgacagcgacaccgaagacaggacccctggggccaggaaggcaaaacgtggg
ggggatagcggtgaagcagtggggaacatgtctgaaagcgtggagccatccgacttggtg
gccttcctgcgtccgcagtacaaggaccggcctcagattgcccgcgtgatacagaggacc
gctgacggctacagcatccgctggctgtctggctcctacaacagcccctggacggaggcc
aagaggcgagagggacgcaaacaagtgccttggctggataccatcaaggagtcggatatc
atctacaagaaactccccctgaccgccagcaacaagttgacccacaaagtagcgcagacg
ctgcgggcgctctatgcgtccaaggccacctccagctag
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integrated database retrieval system
