Alosa sapidissima (American shad): 121715547
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Entry
121715547 CDS
T11137
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1
KO
K25400
sodium channel and clathrin linker 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121715547 (sclt1)
Cilium and associated proteins [BR:
asad03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121715547 (sclt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
YabA
Nup49_C
Motif
Other DBs
NCBI-GeneID:
121715547
NCBI-ProteinID:
XP_041957320
LinkDB
All DBs
Position
1:complement(34184962..34197556)
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AA seq
681 aa
AA seq
DB search
MSTENEFRQGPQQSAGSGYQDPQVSSAMFTQHGEHMGLDPLDPWSMDRSIMAPLIAEYDR
HIDDMTRQLQLYQRQMADIKVKLETVIQENERLHAELRASVEKQLQALPVGSGLDGESVA
DDVILKSLKDQLEHSGNEKQWAMEMWQTAVQELERLQKLHQSSVTDGQAQAAQHQQLRNQ
LVQVQQHLQQLQTMNQKLELTNQQFLKTVTEQSTELDEVRGQLRQAKLDLRTATGKVEEM
TRLLQSVQDQMQRKEDDAAEAHGREETSDRRLQQLQTALGQLESRLKAATQEAEQVRRER
VTWERQVGELQGRCSTLEEEKYEAYAKVRDSIQLAEEASLQKEQAQLREKQKAEELEKMK
EAMRQLVQDAAIRTRKEVENVRKQCNIQIHRMAEELSALQLECTDKEAQIERSHRERKAV
EEELEKMYKEGRSGEPEFRKMEVLHQRCLNAERLKDDMHLTLQTTQTKMKKMEMDYTEEL
SRCQEEVRRLQAALAGARDDCGSISEERLQLQQENQQLRKDMEEQRKASLLAQRKAKQQV
SHMEQEFSVKEQGLDARLRELEESRQSSSADLTRLLLAQQKTTRRWKDEAKKLADAFESK
LSNLKSELLRQKQRSQELENQLEADHERTLEYERQVSEYQERNGRLQRRLSQAEQRAASA
SQQLTILQRRKATSLMDLETL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagaaaacgaatttcggcagggtccccagcaatctgctggtagtgggtaccag
gatcctcaagtctcttctgcaatgtttacacagcatggtgagcacatgggcttggaccct
cttgatccttggtcaatggacagaagcatcatggctccacttatagcagaatatgaccgc
catatcgatgacatgaccaggcagctgcagctgtatcagaggcagatggctgacatcaaa
gtgaaactggagactgttattcaagaaaatgaacgtctgcatgcggagctccgcgcgtca
gtggagaaacagctccaggcattgccagtggggtctggcttggatggggagtccgtggcc
gacgacgtgatcctaaagagcctaaaggatcagctggaacattccggaaatgagaagcag
tgggctatggagatgtggcagaccgctgtgcaggagctggagaggctgcagaagttgcat
cagagctctgtgactgatggccaggcacaggctgcccagcaccaacagctcagaaaccaa
ctagtgcaagtccagcagcatctacagcaactgcaaaccatgaatcagaagcttgaattg
acgaaccagcagttcctgaagacggtgacggagcagagcacggagctggatgaggtgcgt
ggtcagctcaggcaggcgaagctggacctgaggacggccactggcaaagtggaggagatg
actcgcctcctgcagagtgtccaggaccagatgcagaggaaggaggacgatgcagctgag
gcccacggcagagaggagacgtctgaccggcggcttcagcagctgcagactgcattgggg
cagctggagagcaggctgaaggcggcgacccaggaggcggagcaggtgcgtcgggagcgc
gtgacgtgggagcggcaggtgggcgagctgcagggccgctgctccacgctggaggaggag
aagtacgaggcctacgccaaggtgcgcgactccatccagctggccgaggaggcctcgcta
cagaaggagcaggctcagttgcgagagaaacagaaggcggaggagctggagaagatgaag
gaggccatgagacagctggtccaggatgccgccatcagaacccgcaaggaggtggagaac
gtcaggaagcagtgtaacatccagatccatcggatggcggaggagctctcggctctccag
ctggaatgtactgataaagaggctcagatcgagcgttcccatcgcgaaaggaaggcagtg
gaagaggaactggagaagatgtacaaagaagggcggagcggagagccagagttccgtaag
atggaggtcctgcatcagcggtgtctgaacgctgagcgcctgaaggacgacatgcacctc
actctccagaccacacagaccaagatgaagaagatggagatggattacacagaggagctg
tcgcggtgccaggaggaggtgcggcggctgcaggctgcgttggcgggcgcgcgggacgac
tgcggctccatcagcgaggagcgtctgcagctgcagcaggagaaccagcagctgcgcaag
gacatggaggagcaacgtaaagccagcctgctcgcgcagaggaaggccaagcagcaggtg
tcccacatggagcaggagttctcggtgaaggagcagggcctggacgctcgtctacgtgag
ttggaggagagccggcagagctccagcgctgacctcacacgcctgctgctggcccagcag
aagaccaccaggcgctggaaggacgaggccaagaagctagcagacgccttcgagagcaag
cttagcaacctcaagagtgaacttctgaggcagaaacagcgctcacaggagcttgaaaat
cagctagaagcagaccatgaaagaacccttgagtatgagcggcaggtgtcggagtaccag
gagaggaacggccgtctgcagagacggctctctcaagcggagcagagagcggcttcagcc
tcacagcagctcactatacttcagagacggaaagctacttccctgatggatctggagact
ttgtaa
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