Alosa sapidissima (American shad): 121715548
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Entry
121715548 CDS
T11137
Symbol
sart3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121715548 (sart3)
03036 Chromosome and associated proteins [BR:
asad03036
]
121715548 (sart3)
Spliceosome [BR:
asad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121715548 (sart3)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
121715548 (sart3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
HAT_PRP39_C
Suf
LSM_int_assoc
HAT_Syf1_CNRKL1_N
RRM_occluded
FAT
RRM_11
Lsm_interact
RRM_7
RRM_10
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
121715548
NCBI-ProteinID:
XP_041957319
LinkDB
All DBs
Position
8
Genome browser
AA seq
923 aa
AA seq
DB search
METTGEETKLIQLGIEEEGGGKERDLLSDEEGMILDKSDDTSDDEGEIEAEIQRLEEQLS
INAFDYNCHVDLIKLLRQEGKLHRLRKARLKMSELFPLTEELWLDWLKDEIKLAEDVPER
ERMYELFEKAVKDYICPDIWLEYAQYSIGGMGSPGGIEKVRTLFERGLSAVGLHMVKGAA
LWEAYREFELAIMSSLQPVPGDVVTPEQQELLNTQLERINSLFRRQLSVPLMDMDATYEE
YSEWTEGAVPKMVSQSYKRSLQQMEIIKPFEEALLLAEAPKLAEYQSYIDCEVKDGDPAR
IQIIFERALVENCLVPDLWEKYTTYLDRHLKLKDVVLSAHERAVRNCPWTMTLWKNYLLA
LERHSTDHSTVAYTFEKSLHAGFVQATDYVEIWHTYLDYLRRRVDFSKEWSKELDELRGA
FSRSLEYLKDIEDRFSGSEDLSCTIMQIWARIEALHCRNMQKARELWDSIMTKGKAKYAN
MWLEYYNLERSYGDSLHCRKALHRAVQYTSDYPEHVCEVLLTFERVEGTLEDWDSALLKT
ESKLSRVSEQRARTAEKEANQVKHEEVKAEERRRVKANKKTLKKSHKSKYTAEKRKAEKD
DIYEASELPLKRHCGDGDPEGVETEAGQFGLEEPHHKDIGNFGAANRNQQVQPEATRIKH
EATQDKWQDNCSVFISNLAFTLQNPEEQLGTIFQTCGTVKQVRPIFSGHGTFRGYCYVQF
QDPLAVAEALKLDRQELEGRPMFVSPCIDKKKNQDFKVFKYSPSLEKHKIFISGLPYTCT
QQQLEELFKPHGTIKATRLVTNRSGKPKGLAYVEFANEAQASQAVLKMDGMDVQNYTISV
AISNPPGRKMETTSGKQYKSMPPQQTHGARGRSRTQIALLPRSLHRQLVPESTAANGTTR
EPLAVTQNKPMSNEDFAQMLRKK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacaggtgaagaaactaaattgatacaacttggaattgaggaggaaggtggg
ggaaaggaacgggatttgctgtctgacgaagagggcatgatactcgacaaatcagatgac
acatctgatgatgagggagagattgaggctgaaattcagcgtctggaggagcagctctcc
atcaatgcctttgactacaattgccatgtggacctcatcaagcttttgcggcaggaaggg
aaactgcatcgtctacgtaaagcccgattgaagatgagcgagcttttcccacttaccgaa
gagctgtggcttgactggctaaaagatgagattaagcttgcagaagatgttcctgagcga
gagaggatgtatgagctgtttgagaaagcggtgaaagactacatctgtccagatatctgg
cttgagtatgcccagtactccattggtggtatgggatcacctggaggaattgagaaggtc
aggactcttttcgagagaggcctgtctgcagtgggtttacacatggtaaaaggtgctgcc
ttatgggaagcctacagagagtttgagctggctattatgtcatcattgcagcctgtccct
ggagatgtggttacacctgagcaacaggagctgctcaatacccagcttgaacgcattaat
tcactgttccgtcgccagttgtccgtgcctctcatggatatggacgctacgtatgaagag
tacagtgaatggacagaaggggctgtgcccaaaatggtctcccagagctacaaaaggtct
ctacagcagatggagatcatcaaaccttttgaggaagctttgctgctcgctgaagctcca
aagcttgcggaataccagtcttacattgactgtgaagtgaaggatggagatccagcccgc
attcagatcatttttgagcgagctctggtggaaaactgcttggtaccagatttgtgggag
aagtacactacctacttggaccgccatctcaagttgaaagatgttgttctttctgcccat
gagagagcagtcaggaattgcccttggacaatgaccttatggaaaaactatctgcttgcc
ctggagagacactcaacggatcactccactgtagcttatacctttgagaagtccctacat
gctggttttgtccaggctactgattatgttgaaatctggcacacataccttgactacctg
aggagacgggtggatttcagtaaagaatggagtaaagagctggatgagctacggggagct
ttctcaagatctcttgagtatctgaaggatatagaggataggttcagtggaagtgaagac
ctgtcatgcacaataatgcagatatgggcaaggatagaggccttgcattgcaggaacatg
caaaaagcaagagaactttgggacagcatcatgactaaagggaaagccaaatatgccaac
atgtggttggaatactacaacctggagagatcctatggtgattcgttacactgtaggaaa
gccttgcacagagcagtgcagtacacctctgactacccagagcatgtgtgtgaggttcta
ctaacatttgaaagggttgagggtactttggaggactgggattctgcacttttgaagaca
gaaagcaaactctcccgagtcagtgagcagagagccagaaccgcagaaaaggaggccaat
caggtgaaacatgaggaggtaaaagcagaggagcggagaagggtcaaggccaacaagaaa
accctgaaaaagagtcacaaaagcaagtatactgcggagaaaaggaaagctgaaaaagat
gacatctatgaagcatcagagctcccgcttaagcgacattgtggagatggtgatccagag
ggggttgaaactgaggctgggcagtttggtcttgaagagccccatcataaagacataggt
aactttggagctgccaatagaaaccagcaagtgcaaccagaggcaactcggattaagcat
gaggctacacaagacaagtggcaagacaactgcagtgtcttcatcagcaatctggctttc
accttacaaaacccagaggaacaactgggaactatctttcagacctgtggcactgtaaag
caggttcgacctattttctcaggccatggaacttttcgtggttactgctatgtgcagttc
caggacccactagctgtcgctgaagcactgaagctagaccggcaggagcttgagggcaga
cctatgtttgtgtcaccatgcatagacaagaagaagaaccaagactttaaggtattcaag
tacagtccatcattggagaaacacaagatctttatctccggcctgccctacacctgcact
cagcagcaactggaggaactgttcaaaccacatggtacaataaaagccacccgtctggtc
accaaccgttctggcaaacccaagggtctggcatatgtggagtttgctaatgaggcccag
gcctcacaggctgttctcaagatggatggaatggatgttcaaaattataccatttccgtt
gccatcagtaatccacctggaagaaaaatggagaccacctctggaaaacaatacaaatct
atgccaccgcagcagacacatggagctagggggagaagtcgcacacagatcgcccttctc
ccacgctccctgcatcgacagctggtaccagagtcaacagcagcaaatggaaccacgcgc
gagccacttgcagtaacgcaaaacaagcccatgtccaatgaggactttgcccagatgcta
cgcaagaagtga
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integrated database retrieval system
