Alosa sapidissima (American shad): 121715561
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Entry
121715561 CDS
T11137
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121715561 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121715561 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121715561 (usp30)
04121 Ubiquitin system [BR:
asad04121
]
121715561 (usp30)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121715561 (usp30)
Peptidases and inhibitors [BR:
asad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121715561 (usp30)
Membrane trafficking [BR:
asad04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121715561 (usp30)
Ubiquitin system [BR:
asad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121715561 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
121715561
NCBI-ProteinID:
XP_041957348
LinkDB
All DBs
Position
8:2654273..2689358
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AA seq
455 aa
AA seq
DB search
MLRSWGLIGGIVAAMAAGVYVLWGPISDKKKMRKGLVPGLLNLGNTCFLNALLQGLASCP
SFIRWLQEFSERGQGRLERGLSTTLLQLLRALSSHNPIDDDVLDAGCLLDVLRLHRWHIS
LFEEQDAHELFHVLTSSLEEERDPQTTVIHLFDMESLESSSESRENSLSCRGRGPLHSIP
NLWRNQHPFHGRLMSYMACKHCKQQSPVRYDSFDSLSLTIPSVLLGRTITLDQCLQHFIS
SETIREVECVNCTKMQAAESLNGESQRTTFIKQLKLGKLPQCLCIHLQRLTWSSEGTPIK
RQEHVHFTEYLSMDCYKHSASSLQQTNDITQSVHSQNSAIEYSNLKPGSTGPFPSVFLHS
PTLSHPSNFVHDYRCSEYLFRLTAVVVHHGDMHSGHFVTYRRCPASPHCPSSFSSQWLWV
SDDSVRKASLHEALSSSAYLLFYERVCKPTLQTEE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaagctggggactcatcggtggaatagtggcagccatggcagctggtgtttat
gtattgtggggacctatttcagacaaaaagaagatgagaaaaggtttagtgcctggcttg
ttgaatttggggaatacttgcttcctgaatgctttacttcaaggcttggcatcatgcccc
tcctttataagatggcttcaggagttttcagaaagagggcagggcaggcttgaaaggggg
ctgtccacaactctgctgcagctgctcagagctctgtccagccataatcccatagatgat
gatgttttggatgccgggtgcctcctagatgtcctaagactccacagatggcatatcagc
ttatttgaagagcaggatgctcacgagctcttccatgttcttacttcctcactggaggag
gagcgtgatccccagaccacagtcatccatttgtttgatatggaatctctggagagttcc
tcagaatcaagagaaaatagtttatcctgtagaggtcgaggaccactgcattccattcca
aatctgtggaggaaccagcacccttttcatggccggcttatgagttatatggcgtgcaag
cattgcaaacaacagagcccagttcgatatgactcatttgacagcctatccctcactatt
ccctcagtgctgttgggtcgaaccatcactttagaccagtgtctgcaacatttcatctca
tcagaaaccatcagagaagtggaatgtgtaaattgcacaaagatgcaagcagctgagtct
ttgaatggtgaaagtcagaggacaactttcattaagcagctgaaacttggcaagctcccc
cagtgcctttgcatccacttgcagaggttgacttggtccagtgagggcacacctatcaag
aggcaggagcatgtacacttcacagagtatttgtccatggattgttataagcacagtgct
tcaagcctccagcagacaaatgacattacccaatctgttcattcccagaacagtgccata
gagtacagcaacttaaagcctgggtccacaggaccctttccttcagtttttctgcattct
ccaactttaagccatccatccaacttcgtacatgactacaggtgctcggaatacctcttc
agattgacagcagttgtagttcaccatggtgatatgcattctggacactttgttacctac
agacgttgtccagcttctcctcactgcccctcttcattcagttctcagtggttatgggtg
tctgatgactctgtccgtaaggccagcctgcatgaggcactgtcatcaagtgcttacctt
ctgttctatgaaagagtctgtaagcccaccctccagacagaggagtag
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