Alosa sapidissima (American shad): 121715665
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Entry
121715665 CDS
T11137
Symbol
rapgef1a
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04510
Focal adhesion
asad04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121715665 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121715665 (rapgef1a)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
DUF659
Motif
Other DBs
NCBI-GeneID:
121715665
NCBI-ProteinID:
XP_041957482
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Position
8:31725544..31803843
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AA seq
1172 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLKDKFHSPKIKRTPSSKKTPKPPTENTVKTPEKHVNKN
RSRLEEHEKDVVSALRYFKTIIDKMVVDKKVLEMLPGSASKVLEAVLPLVQVDPRIQHSS
AVSSCLNRVYQSLGNLIHWSDQVMLGDEDINLDDKETIVSVTTVIRAVLDGVKELVKLTI
EKQEHPSPTSPVKPVPPVTIQDSTPEAPADETVGEKEKEKERDGEREAPMTPSSTLTRPM
TPSSTLTRSTEVLNDSTDEEVAPPKPPLPGLKVPEHCPPALPPKKRQSAPSPTRVAVVAP
MSRDTGGSSLPIGITKQDYEADALQRRFSGGSHSYGGESPRLSPCSSMGKLSKSDEQLSS
IEQDSGQCSRNTSCETLDITEGYDPDYDFLHQDLSSEGQIATLSMGGCLSPLPESHRESS
SSCPPLYATQSPVPGVVSPYGSPSPLQPPPLQSRVSAPPALQSRVSAPPALPEKRRRSGG
PPHAAASLDAAASPRAPLERLHSHYDNISEEEVHALAQGLALGHHGPPVPPFPLYTHVSP
APATPGAPYGPAHHHFSPIHATDVPQSPPPLPEKKSRHILKYMQFVEDYSEPQPSVFYQT
PXSESIYEQRNKRFQEVYGFNDSFSSSDSMHEPLPPPALPPKQRQLSLDLAAPATPSQDL
LLLANGSLESSAGSLATCLPSDATLSDTRQPLLSESANEEGGEGEYVNLYSSTQASGDGT
LPRRDPTAEDPEDPAADKDMTESDSWRLKSPDSGQSTEEVDELSLIDHEEIMSRITLKQE
NDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHYRYTRFSH
SPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRQLMDLVFRLVCSGELSLARVLRKNI
LDKVEQKKLMRYTISLQPLAARGVAARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVL
LWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIILQEKAQDREKLLLKFIKIMKHLRKLNN
FNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYL
GLILQDLTFVHLGNPDLIEGKVNFSKRWQQFNILDSMRRFQQVHYDLKHNEEIVSFFNDF
SDHLAEEALWELSLKIKPRNIVRRKTDREEKT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaagatagaaagtaagcaagactcccagcgatcccatttgtcttccttcacc
atgaaacttaaggacaagttccactcacccaaaatcaaaaggaccccgtcgtccaagaag
acgcccaagccccccacagagaacacagtcaagaccccggagaagcacgtcaacaagaac
cggagtcggctggaggagcatgagaaagatgtggtcagtgccttgcgttacttcaagacc
atcatcgacaagatggtggtggacaagaaggttctagagatgttgcccggttctgccagc
aaggttctagaggctgttctgcctctggtccaggtggacccaaggatacagcacagctcg
gccgtgtcttcgtgtctgaaccgggtctaccagagcctgggcaacctcatccactggtcc
gaccaggtgatgctcggagacgaagacatcaacctggacgacaaggagaccatcgtgtca
gtcaccacggtgatcagagcggtactggatggcgttaaggagctggtgaagctgaccatt
gagaagcaggagcacccttcccccacctcccccgtcaagcccgtgcctcctgtgaccatc
caggacagcacgccggaggctcctgcggatgagactgttggagagaaagagaaggagaaa
gagagggatggagagagggaggcgcccatgacgccctcctccaccttaacacggcccatg
acgccctcctccaccttaacacggtccaccgaagtcctcaacgactccaccgatgaggag
gtggcccccccaaaaccccccctccccgggctgaaggttcctgagcactgtcctccagcc
cttcctcctaagaagcgccagtcggctccgtctcccacgcgtgtggcagtggtggcgccc
atgagcagagacaccggcggctccagtcttcccatcggcatcaccaaacaggactacgag
gcggacgcgctccagcgacgcttctctgggggaagtcactcgtacggcggcgagtctccg
cgtctgtccccctgcagcagcatgggcaaactcagcaagtcggacgagcagctctcctcc
atcgagcaggacagcggacagtgctcacgcaacaccagctgtgagacgctggacatcacg
gagggctacgacccagactatgacttcctgcaccaggacctgtccagcgagggtcagatc
gctacgctgtccatgggaggctgcctcagccccctccccgagtcgcaccgcgagtcgtcg
tcctcctgccccccgctctacgccacccagtcgcccgtgccgggggtcgtctctccgtac
gggtcgccctctccgctgcagccgccccccctccagtcccgcgtcagcgcgccacccgcc
ctccagtcccgcgtcagcgcgccccccgccctccccgagaagaggcggcgcagcggcgga
cccccccacgccgccgcctcgctggacgccgcggcctccccccgcgctccgctggagcgg
ctgcactcgcactacgacaacatcagcgaggaggaggtccacgccctggcgcaaggactc
gccctcggccaccacgggccgcccgtgcccccgttcccgctctacacacacgtctcgccc
gcgcccgccacgccaggagccccctacggccccgcacaccaccacttcagccccatccac
gccaccgacgtcccacagagcccccccccactgcccgagaagaagagcaggcacatcctg
aagtacatgcagtttgtggaggactactcggagcctcagccctcggtgttctaccagacg
cccnagagcgagagcatctacgagcagcgcaacaagcgcttccaggaggtgtacggcttc
aacgactccttcagcagcagcgactccatgcacgaacccctgcctccacccgcactgccc
cccaaacagaggcaactgagcttggacttggcagccccggccacgcccagccaagacctg
ctgctattggctaacggctccctggagagctctgctggttctctggccacctgtcttccc
tctgacgctactctgtccgacacacgccagcccctcctgagcgagagtgctaacgaggag
gggggcgagggggagtacgtcaatctgtactcctccacccaggccagcggagacgggaca
ctcccccgccgcgacccaaccgctgaggacccggaggaccctgcggcagacaaggacatg
acggagtccgacagctggaggctgaagtctccagactctggacagagcacagaggaggtg
gacgagctctccctcatcgaccacgaggagatcatgtcccgcataacactaaagcaggag
aatgacgatgggccggatgtgcgagctggatcgggagatattcttctggtccacgccaca
gaaactgaccgcaaagatctggtgctgtattgtgaagcgttcctgaccacgtaccgtacg
ttcataaccccagaagacctcattaagaagctccactatcggtacaccaggttttcccac
agcccggacacgtttaagaagcgcgtcagcaagaacaccttctttgtgttggtgcgcgtg
gtggatgagctgtgtctggtggagttgacggaggacatcctgcggcagctgatggacttg
gtgttccggctggtgtgtagtggggagcttagtctggcccgggttctccgcaagaacatt
ctggacaaggtggaacagaagaagctgatgcgctataccatatcactgcagccactggct
gccagaggggtggccgcaaggccgggcacactgcatgacttccgcagtcatgagatagct
gaccagctcactctcctcgatgcagagctcttctacaagatagagatccctgaggtgttg
ctttgggcaaaggagcagaacgaggagaagagccccaatctcacacagttcacagagcac
tttaacaacatgtcctactgggtccgctccataatcatcctccaggagaaagcccaggac
cgagagaaactcctcctcaaattcatcaaaatcatgaagcacttacggaagctgaataac
tttaactcgtatcttgcaatactttctgcgttggattctgcacccatccgaagactggaa
tggcagaagcaaacctcagagggactggaagagtactgcactttaattgacagctcctct
tcgttccgtgcgtatcgggcagcgctggctgaggtggagccaccatgcatcccctatctg
ggtctcatcctccaggacttgacctttgtgcatctggggaaccctgacctcatcgagggg
aaggtgaacttctccaaacgctggcagcagttcaacatcctggacagcatgaggcgcttt
cagcaagtgcattatgatctcaaacacaacgaagagatcgtctccttctttaacgacttc
agcgaccacctggcggaggaggctctgtgggagctctctctgaagatcaagccgcgcaac
atcgtgcggcgcaagactgaccgcgaggagaagacctag
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