Alosa sapidissima (American shad): 121715737
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Entry
121715737 CDS
T11137
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04060
Cytokine-cytokine receptor interaction
asad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121715737 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121715737 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
asad04052
]
121715737 (spaw)
Cytokines and neuropeptides [BR:
asad04052
]
Cytokines
Transforming growth factors (RSTK binding)
121715737 (spaw)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Uma2
Motif
Other DBs
NCBI-GeneID:
121715737
NCBI-ProteinID:
XP_041957568
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Position
8:complement(25215579..25217621)
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AA seq
373 aa
AA seq
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MVKIGNSGIYPANSLSVQWNLDGPRLAFSGAAHHQRNFPLYMMQLYRSYRAADHESAGTT
EEANPLRQANSVVSVTAKGCYQVGDHWSITFDLTSLLPTDMVHLAELRLRVPEFFGSKRV
LLDVFHAHNGQELLLGRIRAAPQHRPHSWQVFNVSALLRYWLQQDQAPHWTEGAELGSGW
TEEGSVNHATTGHVLMVVFSEQRTRSPVPSLLQTAQHSKHVTPQLTPPVIPKEGPLTRRH
KRNRLEPEHLPSPEVTPETPTQATAESPARPLCQRVDMWVDFDQIGWDQWIVHPKRYNAY
RCEGECPSPLDESFKPTNHAYMQSLLRLYHPERVTCPSCVPTRLSPLSMLYYEDDGVVLR
HHEDMVVEECGCQ
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggttaagataggcaactctggaatttatccagcaaatagtttatccgtccaatggaat
cttgacgggccgagattggctttcagtggagccgcacaccaccagcgcaactttccgctc
tacatgatgcagctttatcggtcataccgagcagctgaccacgaatctgcaggtaccact
gaggaggccaaccctctgcgtcaggccaactcagttgttagtgtaacagcaaaaggatgt
tatcaggttggtgatcactggagcattacctttgaccttacgtccttgctgccaactgac
atggtgcatctggcagagctgcgactccgagtaccagaattctttggctccaaacgtgtt
ctgctggatgtgttccatgcccacaatggccaggagttgctactgggccgaatccgcgcc
gcaccccagcacaggccgcactcgtggcaggtattcaatgtcagtgccctgctcaggtac
tggctgcagcaggaccaggctccacactggactgagggagcagagcttgggagcggttgg
actgaggaaggcagtgtcaaccacgcgacgaccgggcatgtgttgatggtggtgttctcg
gagcagcggactcgaagccctgtccccagtttactgcagacggcacagcactccaaacac
gtcacccctcagctgactccaccggtcatcccaaaggagggcccgctgacccggagacac
aagaggaaccggctggagcccgagcacctcccctcacctgaggtcacgcccgagaccccg
actcaggccacagcagagagcccagccaggccactgtgccaacgggtcgacatgtgggtg
gactttgatcagatcggctgggaccagtggatcgtccatccaaagcgctataacgcctac
cgctgtgagggggagtgtccctcaccactggatgagagcttcaagcccaccaaccatgca
tacatgcagagtttgctgaggttataccaccctgagcgggttacgtgcccgtcttgtgtg
cccacacgcttgagcccgctgtctatgctgtattacgaggatgatggtgtggtgcttcga
catcatgaggacatggtggtggaggagtgtggctgccagtga
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