KEGG   Alosa sapidissima (American shad): 121715854
Entry
121715854         CDS       T11137                                 
Symbol
rnft2
Name
(RefSeq) RING finger and transmembrane domain-containing protein 2 isoform X1
  KO
K28516  E3 ubiquitin-protein ligase RNFT2
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asad04121]
    121715854 (rnft2)
Ubiquitin system [BR:asad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121715854 (rnft2)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-rbx1 zf-C3HC4_4 zf-RING_16 zf-RING_6 Prok-RING_4
Other DBs
NCBI-GeneID: 121715854
NCBI-ProteinID: XP_041957800
LinkDB
Position
8:5002958..5015783
AA seq 465 aa
METFFGICARSSFGTLADRLGAMQRRHSSNTDGMPPERNRSQTLGSESSLDEGGVFDCLK
PDSPTTPQQLFSGLVGVSSGAVTSAPFQAAGLVLGSPPDVFIQMTTSSREEGSHRTESQP
FLPRQAQHHHHHHHFHQASQSRSSLLHSASSSATDRHSSRDEGGEDPSTPAPALSELKAV
VSWLQRGIPFILILLVKVCFQHKLGISVCIGMASTFAFANSALKHQVSLREERSVFVTLW
IVVFLAGNIAYLYYTFSSEELYNSLIFAKPSINSFDFFDLIWVVGITDFVLKYITIGFKC
VILFLPKILLAFKSRGKFYLVIEELSQLFRALVPIQLWYKYIMGEDPSNSYFLGAMLIII
YSLCKSFDVCGRISAIRKALVVLCSSQSYGMRASSQQCTEAGDVCAICQSEFRDPVALLC
QHVFCEDCLCQWFDRERTCPLCRSAVIETVRCWKDGTTSAHFQIY
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggagacgttctttggaatatgtgccaggtccagttttggaacacttgctgacagactg
ggtgccatgcagagaagacacagcagcaacacagatggcatgccaccagagaggaacagg
agccaaacactaggctctgaaagcagccttgatgaaggtggagtatttgactgcctcaag
ccagactctcccacaacccctcagcaactcttctctggattggtcggggtgtcgtctggc
gcggtgacctcagcacccttccaggctgccgggctggtcttgggctcgcctccagacgtg
ttcatccagatgaccacgtcctccagggaggagggttcccaccgcactgagagccagcca
ttcctgcctcgccaggcccagcaccatcatcaccatcaccacttccatcaggcatcgcag
agccgctcctcgttgctgcactcggcctcttcctccgccactgaccgccacagcagccgg
gacgaggggggcgaggacccctccacccctgcgccagccctctcggagctcaaggcagtg
gtcagctggttgcagaggggcatcccctttatcctaatactccttgtcaaagtctgtttc
cagcataagttaggtatttctgtatgcattggaatggcaagcacatttgcctttgccaac
tcggctctgaaacaccaggtgtctttacgggaggagaggtctgtgtttgtcacgctatgg
atcgtggttttccttgcagggaacattgcgtatctgtattacacgtttagttcagaagag
ctctacaacagccttatatttgccaagccaagtatcaacagctttgacttcttcgatctc
atctgggtggttggcatcactgattttgtcctgaagtatatcaccattggattcaaatgc
gtcattctgtttcttcccaaaatcctcctggctttcaaatccagggggaagttctattta
gtcattgaggagctgagtcaactattccgggctttggtgcccatccagttgtggtacaag
tacattatgggggaagacccttcaaacagctatttccttggtgccatgctgataatcatc
tacagcctttgcaagtccttcgatgtctgtgggagaatatcagccatccgcaaagctttg
gtggttctgtgtagctctcagagttacggtatgagggctagcagccagcagtgcactgaa
gcaggagacgtgtgtgccatctgccagtctgagttcagagaccctgtggctttgctctgc
cagcatgtcttctgtgaggactgtctgtgccagtggtttgatcgagagcgaacatgcccg
ttgtgtcgctcggcagtcattgagacggtacgctgctggaaggatggcaccacctcggca
cactttcagatctattag

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