Alosa sapidissima (American shad): 121715903
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Entry
121715903 CDS
T11137
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121715903 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121715903 (zgc:65851)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121715903 (zgc:65851)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121715903 (zgc:65851)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
HR1
Fib_alpha
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
121715903
NCBI-ProteinID:
XP_041957875
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Position
8:complement(16035897..16041924)
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AA seq
524 aa
AA seq
DB search
MSFSEYSSSSYRKIFGDAPRHSGRVSVGSSPSRVSSGYRSGAHRTYGSPSSMLSSSYRNK
LGSGRSGYPSMSESMDLTQSTAVTNELKIIRTNEKEQLQGLNDRFVTFIEKVHNLEQQNK
VLEAEVTLLRQRHNEPSRLHDLYEQEIRELRARVEELTHEKSQMHLDCVQMNEALDRVKE
KLDEETKLREEAESTLKTYRKDVDDATLSRLELEKKVESLLDEIAFLRKVHEEELQELQA
SLQATQVSVEMDMSKPDLAVALKDIRAQYEHLSAKNQNQAEEWYRSKIASVSEAAARNSD
AMKHTKDELSEYRRQVQARTLEIDALRGHNEALERQLADMEDRHGNEIGEMQETIQQLEG
ALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSTVGGAMLQSGYSGMS
YTSRSYALSSSAPYRRRGAKPEDEEEEAEDKEEEEEEGEGEGEGEEEGDEEDKGEEGDDQ
EEGEDEEGGDDDEEGEDEQEDEKEKQKEKETEKKKGGPASKSSK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgagtactccagcagttcctatcggaagatatttggagatgcccctcgc
cactccggtcgcgtctccgtcggcagcagcccttctcgcgtgtcctctgggtaccgctct
ggagctcaccgcacctatggctctccatcatccatgctgtcctccagctaccgtaacaaa
ctcggctccggccgcagcggttatccatcaatgtcggagtccatggatctgacgcagtcc
acagccgtcaccaacgagctaaaaatcatccgcaccaacgagaaagagcagctgcaaggt
ctgaacgaccgcttcgtgacattcatcgagaaagtccataatcttgagcagcaaaataag
gtcctggaggctgaggtgactcttctccgccagcgccacaacgagccatcccgcctccat
gacctgtacgagcaggagatccgcgaactccgggcacgagtggaagagctgacccacgag
aagagccaaatgcacctcgactgcgtgcagatgaacgaagcgctggaccgggtgaaggag
aaattggatgaggagacgaagctccgggaagaagccgagagcaccctgaaaacgtaccgc
aaggacgtggacgacgccaccctgtcccgattggaactggagaagaaagttgagtccctg
ctggacgagattgctttcctcaggaaagtccacgaggaggagctgcaggagttgcaggcg
tctctgcaggctacacaggtgtctgttgagatggacatgagcaaaccagacctggccgtg
gctctgaaggacatccgtgcccagtacgagcacctgtcagccaagaaccagaaccaggcc
gaggagtggtaccgctccaagatcgctagcgtgagcgaggcggctgcccgcaacagcgat
gccatgaagcacaccaaggatgagctgagtgagtaccgcaggcaggtgcaggcccgcacc
ctggagatcgatgccctccggggacacaacgaggccctggagaggcagctggccgacatg
gaggaccgccatggcaacgagatcggagagatgcaggagactatccagcagctggagggc
gccctgcgcagcaccaagggagagatgtcccgccacctgcgtgagtaccaggacctgctc
aacgtcaagatggccctggacatcgagattgctgcttacaggaagctactggagggtgag
gagtgccgcctgagcaccgtgggtggggcaatgctgcagtccggctactccggcatgtcc
tacacctcccgtagctacgccctgagctcttctgccccctacaggaggcgtggcgcgaag
cccgaggacgaggaagaagaggcagaggacaaggaggaggaggaagaggagggagaggga
gaaggagagggagaggaggagggagatgaggaagataagggagaggagggagacgatcag
gaagagggagaggatgaggagggaggtgatgatgatgaagagggagaggatgagcaggag
gatgagaaagagaagcagaaggagaaggagacggagaagaagaagggaggaccagccagc
aagagcagcaagtaa
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