Alosa sapidissima (American shad): 121715983
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Entry
121715983 CDS
T11137
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad02010
ABC transporters
asad04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121715983 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121715983 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121715983 (abca2)
Transporters [BR:
asad02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121715983 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
121715983
NCBI-ProteinID:
XP_041958019
LinkDB
All DBs
Position
8:8054900..8123628
Genome browser
AA seq
2548 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEVSFYSAA
PLTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERIAEVVEQNHLFTSDRPSLGEE
LESLQQHLESLSSAHSPLESQFNTSHGFTVGSVLRNQSVFYQFLVRNLSLANDTANLLLS
SPVNLKEVYNLIFGSYAKMGSGDGGLAEGLSAAHSPGEKVLQLEKQLLGGWRSLEGGLIH
KALQDPSKAANRQALLRLLSQALGLAGGGVGQTFDPQGLKEMEGILLTGAVLEVLTCGEG
GNSELGKILLVPEKQQALLQAYRAAICGGGAGQRAERFDEMSQELKEQIDTQSIIEKLRL
EQANVSGLLSQSHLGALLKDLADVERLLRDVDLLSSLALLLPKGACAGHQASPAANASGG
SSWNTNSSSTTTSSSTTTTWGPNTTDSLAGGGAEGGGGGGGEGTPGKEEENPRSQFSAFV
QLWAGLQPILCGNNRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGS
QVDKVIQKANETFAFVGNVTHYARVWLNISADLRTFLEEGKLHNHLAWLQQFTSDLRQHP
ELLNASDSELLHSLLEGNFSLPNTTTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEE
SIVNYTLNQAYHDNVSVFASVIFQTNKDGSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPG
PNTGGKFYFLYGFVWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHM
MPLCMVISWVYSVAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTA
LTAILKYGRVLLHSDPFIIWLFLTIYAVATIMFCFLVSVIYSKAKLASACGGIIYFLSYV
PYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVE
GDDFNLLLSMVMLIIDATVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWE
WPWGGAAMLSVMEEDQACALEHRRSEEMRGIEEEPSHLPLVVCIDKLTKVYKTGSKLALN
KLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGM
CPQHNVLFDKLSVEEHLWFYSRLKGMAEDDIRKEMDKMIEDLELSNKRHSLVQTLSGGMK
RKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLG
DRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQRDSSSGADQGGQPLGSHSPSTAQP
SSLSGCSESRVTQFIRQFVASCLLMSNTNTELSYVLPSEAAKKGCFERLFQALERSLDNL
ALTSFGVMDTTLEEVFLKVSEEDLSLENSDADMKDSPGGNSAGKPSALLSGPRGDGQPVG
GSGGGGGGGGSGSGGVMRPEVELSNLITCSRLSQSQNSLRSGSSLGSVRGDEGGLYADFY
GDYCPLFDNGQDPDSASLRDGEASPEPVLEGQGSFKLEGWWLKLRQFHGLIVKRFHCAKR
NTKGLFSQIMLPAFFVCVAMTVALSVPSIGDLPPLILSPSQYHNYTQPRGNFIPYANEDR
PQYRSKRSPDAGPQKIINTLRLPSGVGATCVLKTPFNSTLDQLAQTLNPYANNSKTLAAR
YFDPMCLDSFTQGVPLSNFVPPPPSPAPSDDPEPRFDDGLWNYTSPPPTTVREMVTSPPT
LPLSIHEPVKCICSMQGTGFSCPSGVGGRPPLTKVVTGDILVDITGRNVSEYLLYTSDRV
RLHRYGGLTVGNIQKSVPASFGRKIPPMVRKIAVRRSAQVLYNNKGYHSMPTYLNVLNNA
ILRANLPLNKGNPAAYGITLTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASF
VVFLVAEKSTKAKHLQFVSGCDPVIYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTSP
KNFPAVLSLFLLYGWSITPIMYPASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFE
HDKDLKLVNSYMKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKVKSPFEWDIVT
RGLVAMTIEGFVGFLITILCQYNFLRKPQRVPVSSQPIEDDDVDVACERRRVLRGDADND
MLKIDNLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDETTTG
GEAFIGGHSILRELLKVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEERVVQW
ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLI
LDIIKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKT
TSSVKEVVKFFNRNFPEAILKERHHTKIQYQLKSEHISLAQVFSKMEQVVEVLSIEDYSV
SQTTLDNVFVNFAKKQSDNLEQQENSPRGGGQSPLQRLLNLLRPKPANTELNALVCDEPE
ELESDDDEGLISFEEERVQLSFNTDTLC
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atgggattccttcaccagcttcatctcctgttatggaagaatgtgtctttaaagcgaagg
ggaccgtgggtgctggcctttgagatcttcatcccactggtcctcttcttcatcctgctg
ggccttcggcaaaagaagcctgccatccccgtcaaagaagtgtccttctacagcgcagcc
cccctgacgtcggccggcatcatccccatcatgcagtccttgtgcccggacggccagcgg
gacgagttcggcttcctccagtacaagaactccactgtgacccagctgctggagcgcatt
gccgaggtggtggagcagaaccacctgttcacgtcggaccggcccagtctgggcgaggag
ctggagtcgctgcagcagcacctggagagcctcagctcggcccacagccctctggagagc
cagttcaacaccagccatggtttcactgtgggcagtgtgctgaggaaccagtcggtgttc
taccagttcctggtgcggaacctctctctagccaatgacacggcgaaccttctgctctcc
tcacctgtcaatctcaaagaggtgtacaacctgatctttggctcctacgctaagatgggc
agtggagacggagggctggccgaggggctgagtgcggctcacagccctggggagaaggtc
ctgcagctggagaagcagttgctgggcgggtggcgtagcctggagggcggcctgatccac
aaggccctgcaggaccccagcaaagcagccaatcggcaggctctcctccggctcctctcc
caggccctgggcctcgccggtgggggtgtgggccagacgtttgaccctcagggactcaag
gagatggaggggatcctgttgactggcgcagtgctcgaggtgctcacttgcggagagggc
gggaacagtgagctcggcaaaatcctattggttcccgaaaaacaacaggccctgctccag
gcctatcgcgcggccatttgcggtggaggggcgggccaacgagcggagcgattcgacgag
atgagccaggaactaaaagagcagatcgacacgcagagcataattgagaagttacgtctg
gagcaggcgaacgtgtccggcctgctctcccagtcccacctgggggctctgctgaaggac
ctggccgacgtggagcggctcctgagggacgtggacctgctgtccagcctggctctcctg
ctccccaagggggcctgcgccgggcatcaggcctccccggccgccaacgcctccggaggg
tccagctggaacaccaatagcagcagcaccacaaccagcagcagcaccaccaccacctgg
ggccccaacaccaccgactccctagcgggtggaggagcagagggaggaggaggaggagga
ggagagggaactcctgggaaagaggaggagaacccgcgctcacagttctcagcattcgtg
cagctgtgggctggcctgcagcctatcctctgtgggaacaacagaataatcgaacccgag
gcactaaagcagggcaacatgagctccctgggcttcacaagcaaagaacagcgcaatctt
ggccttctggtgcatcttatgactacgaatcccaagatcctctactctcctattggttcc
caagtggacaaggtcattcagaaggccaacgagacgtttgcgtttgttgggaatgtgacc
cactatgcccgtgtgtggctgaacatctcagctgatctcaggacctttctggaggaaggc
aaactacacaatcacctggcctggcttcaacagttcacctcggacctgcggcagcacccg
gagctgctgaacgcgtcggacagtgagctgctgcacagcctgctggagggcaacttcagc
ctgcccaacaccaccaccctgctggagcaactggacaccatcgacaacgccgcctgcgga
tggacacacttcatgtccaaggtcagcgtggatatcttcaaaggctttcctgatgaagag
agcattgtgaactacaccctgaaccaggcctaccatgacaatgtgtcagtctttgctagt
gtgatttttcagaccaacaaggatggctctcttcctccgcacgtcatgtacaagatcaga
cagaactcgagcttcaccgagaagaccaatgagatccgccgagcgtactggcggcccggg
cccaacacgggcggaaagttctacttcctctacggcttcgtgtggatccaggatatgatg
gaaagagccatcatcaacaccttcgtgggccatgacgtggtggagccagggaactacgtg
cagatgttcccttatccctgctacacgcgcgatgatttcctgtttgtgatcgagcacatg
atgccgctgtgcatggtcatctcctgggtgtactcggtggccatgatgatccagcacatc
gtggccgagaaggagcaccggctcaaagaggtgatgaagatgatgggcctgaacaacgct
gtgcactgggtggcctggttcatcacaggctttgtccagctctccatctccgtgacagca
ttgaccgccatcttgaagtacggccgcgtcctgctgcacagtgaccccttcatcatatgg
ctgttcctcaccatctacgccgtcgccaccatcatgttttgtttcctggtgtcggtcatc
tactctaaggccaagctggcgtctgcctgcggaggcatcatctacttcctgagctacgtg
ccttacatgtacgtggccatccgagaggaggtggcccatgacaagatcacagccttcgag
aagtgcattgcgtccctgatgtccaccactgcgttcggtctgggctccaagtacttcgcc
ctgtacgaggtggccggggtgggcatccagtggcgcaccatcaaccagtcgccagtagag
ggcgacgacttcaacctgctgctgtccatggtcatgctcatcatcgacgccaccgtgtac
ggcgtgctgacctggtacatcgaggccgtgcatcccggtatgtatgggctcccgaggccg
tggtacttccccctgcagaagtcctactggctgggcagcgggcgtgtggagacctgggag
tggccctggggcggtgcggccatgctgagcgtgatggaggaggaccaagcgtgtgccctg
gagcaccgccgctcagaggaaatgcgcggtatagaagaggagcccagccacctgcccctg
gtggtgtgcatcgacaagttgaccaaagtctacaagacgggcagcaagctggcgctcaac
aagctcagcctcaacctgtacgagaaccaagtggtgtccttcctaggccacaacggggct
ggcaagaccaccaccatgtccattttgactggcctgttcccacccacgtcgggctcagcc
acgatctacgggcacgacatccgcacagacatggagcgcatccggcagaacctgggcatg
tgcccgcagcacaacgtgctcttcgacaagctgagcgtggaggagcacctgtggttctac
tcacgcctcaaaggcatggccgaggacgacatccgcaaggagatggacaagatgatcgaa
gacctggagctgtccaacaagcgtcacagcctggtgcagacgctgtccggcggcatgaag
cggaagctctcggtggccatcgctttcgtgggcggctcgcgggccgtcatcctggacgag
cccacggctggggtggacccgtacgcccggcgtgccatctgggatctcatcctgaagtac
aagcagggccgcaccatcctgctgtccacccatcacatggacgaggcggacctgctgggt
gaccgcatcgccatcatctcccacggcaagctcaagtgctgcggctcgccactcttcctg
aagagcacctacggcgacggctacaagctcaccctggtcaagaagcagagagactcatcc
agtggagcagaccagggcggccagcctcttggctcccactccccctccactgcccagccc
tcatccctgtccggctgctcggagagccgggtcacccagttcatccgtcagtttgtggcg
tcctgcctgctgatgtccaacaccaacacggaactctcttacgtgctgccctcggaggcc
gccaagaagggctgctttgagaggctcttccaggccctggagcggagtttggacaacttg
gccctgaccagtttcggggtgatggacaccacactagaagaggtttttctcaaagtctca
gaggaggatctctccctagagaacagcgatgctgacatgaaggactctccggggggtaac
tctgctgggaagccctcggctctgctcagcgggccacggggcgacggccagccagtaggg
ggcagcggtggcggcggtggcggcggcggcagcggcagtggtggtgtgatgcggcccgag
gtggagctcagtaacctgatcacatgctcgcggctcagccagagccagaactccctgcgc
tctggctcttcgctggggtcagtgcgcggcgacgagggtgggctctacgccgacttctac
ggcgactactgcccgctgttcgacaatggccaggaccctgactctgcaagcctgagagac
ggcgaggcttccccggagcctgtgctggagggccagggcagcttcaagctggagggctgg
tggctcaagctgcgccagttccacggcctcatcgtcaagcgcttccactgcgccaagagg
aacaccaagggcctcttctcccagatcatgctgcccgcgttcttcgtctgcgtggccatg
acggtcgccctgtctgtaccttcaataggagacctgccgcccctgattctgtctccgtcg
cagtatcacaactacacacagccacgggggaatttcatcccctacgcgaatgaagacagg
ccgcagtacaggagtaagcgctctcccgacgccggccctcagaagatcatcaacaccctg
cggctgccctcgggcgtgggggccacctgcgtgctcaagacgccgttcaacagcacgctg
gaccagctggcccagacgctcaacccctatgccaacaactccaagacgctggccgcgcgc
tacttcgaccccatgtgcctggactccttcacgcagggcgtgccgctctccaacttcgtg
ccaccgccgccctcgccggccccctcggacgacccggagccgcgcttcgacgacggcctg
tggaactacacctcgccacctccgaccactgtgagagagatggtgacgtctcccccgacg
ctacccttgtccatccatgagccggtcaagtgcatctgctccatgcagggaactggcttc
tcctgccccagcggggtgggcggccggccccctctcaccaaggtggtgacgggggacatc
ctggtggacatcacgggacgcaacgtctcggagtatctgctgtacacctctgatcgcgta
cgcctccacagatatggcggtctcacagtgggcaacattcagaaatccgtgccggcctcg
ttcggcagaaagataccccccatggtccgcaagatagcggtgcggcggtcagctcaggtg
ctctacaacaacaaaggctaccacagcatgcccacctatctcaacgtgctcaacaatgcc
atcctgcgtgccaacctgcccctcaacaagggcaacccggctgcctacggaattaccttg
acaaaccatcccatgaatcgaaccagcgccagtttgtctctggactacttgctgcagggc
acagacgtggttattgccatcttcatcatcgtggccatgtcctttgtgccagccagcttt
gtggtctttctggtggcggagaagtccactaaggccaaacatctgcagtttgtcagcggc
tgtgaccctgtaatctactggctggccaattacatctgggacatgctgaactacttagtt
cctgccacatgctgtgtcctgatcttgttcgtgtttgacctcccggcgtacacctctccc
aaaaacttccccgccgtcctctcgctctttctgctgtacggctggtccatcacgccaatc
atgtacccagcctcgttctggtttgaagtccccagcacggcgtacgtgtttctcattgtc
atcaacctcttcatcggcatcaccgccacagtggctaccttcctgctacagttgtttgag
catgacaaggatctaaagttggtgaacagttacatgaagtcctgcttcctcatcttcccc
aactacaacctgggccacgggctcatggagatggcctacaatgagtacatcaacgagtac
tatgccaaaataggtcagtttgacaaggtgaagtctccgtttgaatgggacattgtaacc
cgaggcctggttgccatgacgatcgaggggttcgtgggcttcctcatcaccatcctgtgt
cagtacaacttcctcaggaaacctcagagggtgccggtgagcagtcagcccatagaggac
gatgacgtggacgtggcctgtgagagacggcgtgtgctcagaggagacgcagacaacgac
atgctgaagatcgacaacctcaccaaggtgtacaagtccaggaagatgggccgcatcctg
gcggtggaccgcctgtgtctgggcgtgaggcccggggagtgcttcggcctgctgggggtg
aacggagcggggaagaccaccacgttcaagatgctgacgggagacgagaccaccactgga
ggagaggccttcattggtggacacagtattctgcgggagctgctgaaggtgcagcagagc
attggctactgcccgcagtttgacgccctgtttgaggacctgacggccagagagcacctg
gagctctacacccgcctgaggggcatcccttggaaggatgaggagcgggtggtgcagtgg
gctctggagaagctggagctcactaagtatgcagacaagccagctggcacttacagtgga
ggcaacaagcgcaagctatccaccgcaattgcactcatcggctacccctccctcatcttc
ctggatgagcctaccacaggcatggaccccaaggccagacgtttcctgtggaaccttatc
cttgacatcatcaaaacaggacgctcggtggtgcttacatcacacagtatggaagaatgt
gaggcactatgcaccaggttgggcattatggtcaatggcagattcaaatgcttagggagt
atacagcaccttaagaacagatttggtgatggctacatgatcacagtacgcactaaaacc
acaagtagtgtgaaagaggtggtcaaattcttcaacaggaattttccagaagctatactt
aaggagcgacaccataccaaaatccagtatcagctgaagtcagagcatatttctctggct
caagtgttcagtaagatggagcaggtggtggaggtgctaagcatcgaagattactctgtc
agtcagaccacactggacaacgtttttgtcaactttgccaaaaagcaaagcgacaacctg
gagcagcaggagaactcgccccgcggtggcggccagtcgccactacagcgcctgctcaac
ctcctgcgccccaagccggccaacacggagctcaacgccctcgtgtgtgacgagcccgag
gagctggagagcgacgacgacgaagggctcatcagctttgaggaggagagggtccagctg
tctttcaacacagacaccctctgctga
DBGET
integrated database retrieval system
