KEGG   Alosa sapidissima (American shad): 121716912
Entry
121716912         CDS       T11137                                 
Symbol
pak1ip1
Name
(RefSeq) p21-activated protein kinase-interacting protein 1-like
  KO
K14830  protein MAK11
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:asad03009]
    121716912 (pak1ip1)
Ribosome biogenesis [BR:asad03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    121716912 (pak1ip1)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP PEP5_VPS11_N Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WD40_like ANAPC4_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_HPS5 Ge1_WD40 Beta-prop_IP5PC_F WDR54 Beta-prop_WDR75_2nd BBS2_Mid B-prop_COPA_B_2nd CNH DUF5050 Beta-prop_IFT140_2nd Beta-prop_RIG_1st Beta-prop_IFT80_2nd DUF5998 Ribosomal_L6e
Other DBs
NCBI-GeneID: 121716912
NCBI-ProteinID: XP_041958451
LinkDB
Position
1:11819373..11823087
AA seq 363 aa
MGVEVEVVAGSYEQISFGYHVCRDGEDWTTTPDFTHHAHTASLSAVASNNRYIATGSKDE
TIQLYDMKKKIEQGALLHHDGTISCLEFYGSSHLLSGGEDGLMCVWRTKKWECLKTIKAH
KGRLSSLSVHPSGKLALSVGTDKTLRTWNLTDGRSAFIKNLKQNADIVRWSLEGDKYVVV
TSDKIDVYNLDTATVTATITNPTRISSVKFVQNTCLAVAGDDETVRLFDLTTEKCTCEFK
AHENRVKAVDCFMLDDFCVIVTASNDGFIKLWKLHLDKLPEPPKLLLEVNTTARLTCLTV
FKPTAESEATEKQSPQPTSSTATDDLPLPSKNKRVRIATEEVVLEEERSTKKVKKGGNKK
KTQ
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgggcgttgaagttgaggttgttgctggaagttatgagcagatttcatttggttatcat
gtgtgcagagatggagaggactggacaaccacgcctgacttcactcatcacgcacacaca
gctagcctgtcagctgtagcatctaacaacaggtatattgccacaggcagtaaagacgag
accattcagctttatgacatgaagaagaagattgaacagggggccttactgcaccatgat
ggtaccatctcgtgtctggagttctacggctcatcccacttgctcagtggaggagaggat
ggactgatgtgcgtgtggaggacaaagaagtgggagtgtctgaaaaccataaaagcacac
aagggccgcttgtcctcgttatcggtccacccatctggaaaacttgctctgtcagttggt
acagacaaaacactcagaacatggaatctaaccgatggaagatcagcatttatcaaaaac
ctcaagcagaatgctgatatagttaggtggtctcttgagggagataaatatgtggtggtg
accagcgataagatagatgtttacaaccttgacactgccacagtgactgcaaccatcacc
aatcccacaagaatatcatctgtcaagtttgtacagaacacttgtctggctgtggctggt
gatgatgagacagtccgcctctttgacctcacaacagagaagtgtacatgtgagttcaag
gcccacgaaaatagggtaaaagctgtggattgttttatgctggatgacttctgtgttatt
gtgacggcgtcaaatgatggattcatcaaattgtggaaactgcatcttgacaagcttccc
gagcctcccaagcttttgttggaggtgaacacgacagcaaggctcacctgtctgactgtg
ttcaagccgactgcggagagtgaggccacagagaaacaaagtcctcagccgacctcttct
acagccacagatgacctgcctttaccctccaagaataagagagtcaggattgctacagag
gaggttgttcttgaagaagagcgtagcaccaaaaaggtcaagaagggtggtaacaagaaa
aagacccaataa

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