KEGG   Alosa sapidissima (American shad): 121718022
Entry
121718022         CDS       T11137                                 
Symbol
wdr83
Name
(RefSeq) WD repeat domain-containing protein 83
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:asad03041]
    121718022 (wdr83)
Spliceosome [BR:asad03041]
 Complex C
  Other components
   Complex C specific factors
    121718022 (wdr83)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_IP5PC_F WD40_like Beta-prop_DCAF12 PQQ_2 PEP5_VPS11_N PALB2_WD40
Other DBs
NCBI-GeneID: 121718022
NCBI-ProteinID: XP_041958706
LinkDB
Position
9:9774189..9777725
AA seq 320 aa
MAFPLPRPLPPQLPKHLHRAIDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLL
KTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVRFNEE
ASVILSGSIDGTVRCWDTRSRRFEPIQILDDARDGVSSLMVCEHEILTGSVDGRVRHYDL
RMGQLHVDFISSPITCVCFSQDGQCMLSSSLDSTVRLLDKNTGEMLGEYTGHQNKSYKLD
CCLSSKDTHVLSCSEDGHVYYWDLVEGSITLKLPVGKGVVQSLSFHPTEPYLLTATEGRV
QVWGAEEPEDANEEGMEPQE
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcatttccactgccacggccactgcctcctcagcttccaaagcacttgcaccgagct
atagattgtcaacagggagccgtcagagctgtgcgtttcaatgccgatgggaactatctg
ttgacgtgtggcagcgacaagtcgttgaagctttggagtgtctctaggggaaccttacta
aagacctacagtggccatggttacgaggtgctggatgcagatgggtcttacgacaacagt
cagctctgttcctgcagctcagataagacggtgatcctgtgggatgtggcatcaggacaa
gtgacccgcaaactgagaggccacgccggaaaagtcaactgtgtgcggttcaatgaggag
gcttcggtgatactgtcaggttccattgacgggacagtacgatgttgggacacccgctca
cggagattcgagcccattcagattctggacgacgcccgggatggagtcagcagcctcatg
gtgtgcgaacacgaaatcctaactggctctgtggatgggagagtgaggcattatgacctg
cgcatggggcagctccatgtagacttcatcagcagccccatcacctgtgtgtgcttcagt
caggatgggcagtgcatgctctcctccagcctggactccacggtgcgtctgctggacaag
aacacgggcgagatgctgggagagtacacgggtcaccaaaacaagagctacaagctggac
tgctgcctctccagtaaagacacacacgtgctgagctgctcagaggatggccatgtgtac
tactgggatctagtagagggatccatcacgctgaagctgcccgtgggcaaaggggttgtc
caatcactttcgtttcatccaacggagccctaccttctcactgcaacagagggacgtgtt
caggtttggggggcagaagaaccagaggacgcaaatgaagagggcatggagcctcaagaa
taa

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