Alosa sapidissima (American shad): 121718102
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Entry
121718102 CDS
T11137
Symbol
pin1
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03250
Viral life cycle - HIV-1
asad04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121718102 (pin1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121718102 (pin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121718102 (pin1)
03110 Chaperones and folding catalysts [BR:
asad03110
]
121718102 (pin1)
Enzymes [BR:
asad01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121718102 (pin1)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121718102 (pin1)
Chaperones and folding catalysts [BR:
asad03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
121718102 (pin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
WW
Rotamase_2
WW_TCERG1
X8
Motif
Other DBs
NCBI-GeneID:
121718102
NCBI-ProteinID:
XP_041958895
LinkDB
All DBs
Position
9:complement(20865356..20868953)
Genome browser
AA seq
158 aa
AA seq
DB search
MADDEKLPSGWEKRMSRSSGRVYYFNHITNASQWERPVGSGDGRGDPDKVRCSHLLVKHN
QSRRPSSWREENITRSKEDALDLIQKYIEKIKSGEEKFENLASQFSDCSSARNGGDLGLF
GRGQMQKPFEDASFALKVGDMSGPVFTDSGVHIILRTG
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatgaaaaattaccgtccggatgggaaaagcgaatgagtcgcagttcaggc
agggtgtactacttcaaccacatcactaatgccagccaatgggagcggccggttggctcc
ggcgacgggcgaggggaccccgacaaagtgcgctgctctcacctgctggtgaaacacaac
cagtcacggcggccgtcgtcatggcgtgaggagaacatcacccggagcaaggaagatgcc
ctggatctcattcagaagtacatcgagaagatcaagtccggtgaggagaagtttgagaac
ctggcctcccagttcagtgactgcagctctgcccgaaatggaggagatctgggcttattc
ggtcgaggtcagatgcagaagccgtttgaggacgcttcgttcgctctgaaagtaggggac
atgagcggtcctgtgttcactgattctggagttcacatcatcctgcggactggttga
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