Alosa sapidissima (American shad): 121718256
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Entry
121718256 CDS
T11137
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04517
IgSF CAM signaling
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121718256
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121718256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121718256
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121718256
Intermediate filaments
Intermediate filament-binding proteins
121718256
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
121718256
NCBI-ProteinID:
XP_041959115
LinkDB
All DBs
Position
9
Genome browser
AA seq
2403 aa
AA seq
DB search
MWKRACGGERVSVSVRQTRRQEEEPCPPSTPPLLTPPRDPPIPPPPPAPEVTMTTVAAEL
EPMELQQQYTGDTPVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKKTFTKWVNSH
LSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQR
VHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLLWCQMKT
AGYTNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNVHYNLQNAFNLAEQHLGL
TKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKY
ESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLF
TIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRF
DRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVAVARE
LDVENYHDIKRINARRDNVLRLWEYLLELLKARRHRLEMNLGLQRVFQEMLHIMDWMDEM
KMLLLSQDYGKHLLGVEDLMQKHALVEADIGIQADRVKAVNNNAQKFAVDEDGYKPCDPQ
VIRDRVSHMEFCYQELIQLAAERRARLEESRRLWKFFWEMAEEEGWMREKEQILSSDDCG
KDLTGAARLLSQHRALEDEMSGRKAKLHETAREGEEMADAGHFGAERLRERAAEVRAQWA
ALEALAAARKARLEEACALHQFLVDADDADAWTLDALRVVSTGDLGHDEFSTRALAKKHQ
GAAEEVASYRPVVDALHEQAKALPAHHADSDEVKGRLAGIEERYAEVVELTRLRKQALSD
ALAFYKMLSEAEACEVWIDEKQQWLDHMEIPEKLEDLEVVQHRFESLEPEMNSQASRIAV
VNQIARQLIHNGHPSEKDIKAQQDKLNTRWSQFRELVDRKKELLQSALGVQNYHLDCNET
KSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLKGEAGRLAEEHP
DQADAINGQLAEIASVWEEMKETLRAREESLGEASKLQGFLRDLDDFQAWLSRTQTAIAS
EDMPNTLAEAEKLLAQHEAIKNEIRNYEEDYQKMRDMGEMVTRGQTDAQYMFLHQRLQAL
DTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAA
IKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINAEKIQERVTSIDDRHKKNREAAVEL
LMRLKDNRDLQKFLQDCQELNLWINEKMLTAQDMTYDEARNLHSKWLKHQAFMAELQSNK
EWLDKIDKEGQQLVAEKPETEAVVREKLASLQKQWEELESTTQTKAQCLFDANKAELFTQ
SCADLDKWLAGLEGQIQSDDYGKDLTSVNILLKKQQMLESQVEVRQREVVELQSQAVALS
QEGRDTEEVDGQRQVVEQKFSELLDPLRKRKNMLMVSLEIHQFNRDVEDEILWVEERMPI
AMSTDHGHNLQTVQLLIKKNQTLQKEIQGHQVRFDDIFERSQSLVGDESPSAEGIRARLA
ELQDLWARLADETAKRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSV
AMLKKHQILEQAVEDYAEAVHQLSKTSRGLVAAGHPESERIGMRQSQVDKLYAGLKDLSE
ERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTG
TIGQERVDSVNRMADELINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQILAASYELH
KFYHDAKEILGRVLDKHKRLPEELGRDQNTVETLQRMHTAFEHDIQALGTQVKQLQEDAA
RLQSAYAGDKADDIQRREGEVLEAWRCLLEACDGRRVRLLDTGDKFRFFSMVRDLMLWME
DVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASEEI
KEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSAGSMGQS
VDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRRPPTPEPLVE
HGEVQREGEQVTQNGLPSDQDSPRDGGEIVNGVAERSSKEPSPIPSPTSDRRAKGGSQAS
TLPAKGQDSPAAQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNQEMGFYKDNKNASQG
IPYHNEIPVSLREAVCEVATDYKKKKHVFKLKVTDGNEYLFQAKDDEEMNTWIQAIQNAS
MGSASSDKSEITPSSNQSTPATSRAQTLPATVTLTTESSPGKREKDKEKDKEKRFSLFSK
KKQ
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcgagcgtgtgggggcgagcgagtgagcgtgagcgtgcgccagacgagacga
caagaagaggaaccctgccccccctccaccccgcccctcctgaccccccctcgtgatccc
cccatcccaccgccgccgcccgcgccagaggtcaccatgacgaccgtggcggccgaactg
gagcccatggagctccagcagcagtacaccggcgacacgcccgtcaacaaccgctgggac
gacgactgggacaacgagaacagctccgcgcggcttttcgagcgctcgcgcatcaaggcc
ctcgccgatgaacgtgaggcggtgcaaaagaagaccttcaccaaatgggtgaactcgcac
ctgtcgcgcgtctcctgccgcatcaccgacctctacatggacctgagggatggacgcatg
ctcatcaagctgctggaggtgctctccggagagagactgcccaagcccaccaaaggccgc
atgcgtatccactgcctggagaatgttgacaaagccttgcagttcctcaaagagcagaga
gttcacctggagaacatgggctcccatgacatcgtcgacggcaaccatcgcctcacgctt
ggtctcatctggactattatcctccgcttccagatccaggacatcagcgtggaaacggag
gacaacaaggagaagcgttcggccaaggacgccctgctcctctggtgccagatgaagacg
gcaggctacaccaacgtcaacattcacaacttcaccacgagctggcgtgatggaatggct
ttcaacgccctcatccacaaacacaggccggatctcattgactttgacaagctgaagaag
tccaacgttcactacaacctgcagaacgctttcaacctggccgagcagcacctgggtctg
accaagctactggacccagaggacatcagcgtggaccaccctgatgagaagtccatcatc
acctacgtggtcacatactaccactacttctccaagatgaaggctctgaaagtggaaggc
aagcgtattggcaaggtgcttgacaacgccatcgagacagagaagatgatcgagaagtac
gagtcgctggcctcagacctgctggagtggatcgagcagaccatcattatcctcaacaac
cgcaagttcgccaactcactggtgggagtccagcaacagctgcaggccttcaacacatac
cgcaccgtggagaaacccccaaagttcacagagaaaggtaacctggaagtcctgctattt
accatccagagcaagatgagagccaacaaccagaaagtctacatgcctcgagagggcaaa
ctcatctctgacatcaacaaggcctgggagcgcttggagaaggcggagcatgagcgggag
ctggcactgcgcacagagctgattcgccaggagaagctggagcagctcgcccgccgcttt
gaccgcaaggccgccatgagggagacctggctcagcgagaaccagcgcctagtctcacag
gacaactttggcttcgatctgcaagcggtggaggcggccaccaaaaagcacgaggccatc
gagacggacatcgccgcgtacgaggagcgcgtgcaggccgtggtcgccgtggcgagggag
ctggacgtggagaactaccatgacatcaagcgcatcaacgcgcggcgcgacaacgtgctg
cgtctgtgggagtacctgctggagctgctcaaggcgcgccgccaccgcctggagatgaac
ctgggcctgcagagggtcttccaggagatgctccacatcatggactggatggacgagatg
aagatgctgctgctgtcccaggactacgggaagcacctgctgggtgtggaggacctaatg
cagaagcacgccctggtggaggccgacatcggcatacaggccgaccgcgtcaaggccgtc
aacaacaacgcacagaagtttgccgtggacgaggacggctacaagccgtgcgacccgcag
gtgatccgcgaccgcgtgtcccacatggagttctgctaccaggagctgatccagctggcg
gccgagcggcgcgcgcgtctggaggagtcgcggcgcctctggaagttcttctgggagatg
gccgaggaggagggctggatgcgcgagaaggagcagatcctctcgtcggacgactgcggc
aaggacctgacgggcgcggcgcggctactcagccagcaccgggcgctcgaggacgagatg
agcggccgaaaggccaagctgcacgagacggcgcgcgagggcgaggagatggccgacgcg
ggccacttcggcgcggagcggctgagggagcgggcggccgaggtgagggcgcagtgggcg
gcgctggaggctctggcggcggcgcggaaggcccggctggaggaggcgtgcgcgctgcac
cagttcctggtggacgccgacgacgccgacgcctggacgctggacgcgctgcgcgtggtc
tccacgggcgacctgggccacgacgagttctccacgcgcgccctcgccaagaagcaccag
ggggccgccgaggaagtggccagctaccggccggtcgtggacgctctccacgagcaggcc
aaggcgctgccggcacaccacgccgactcagacgaggtcaagggccgtctggcgggcatc
gaggagcgctacgcggaggtggtggagctgaccaggctgaggaagcaggctctgagcgac
gctctggccttctacaagatgctgagcgaggccgaggcctgcgaggtgtggatcgatgag
aagcagcagtggcttgaccacatggagatccccgagaagctggaggacctcgaagtcgtc
cagcacaggttcgagagtttggagcctgagatgaacagccaggcctctcgtatcgctgtg
gtcaaccagatcgccaggcagctgatccacaacgggcacccaagcgagaaggacatcaag
gcccagcaagacaagcttaacaccaggtggagccagttccgtgagcttgtggaccgcaag
aaggagctcctccagtcggcgctgggcgtgcagaactaccacctggactgcaacgagacc
aagtcctggatccgagagaagaccaaggtgatcgagtcgacgcaggagctgggcaacgac
ctgacgggcgtcatggctctgcagcgcaagctgacgggcatggagcgcgacctggcagcc
atcgaggacaagctgggcgacctgaagggagaggccggacgcctggctgaggagcacccg
gaccaggcagacgccatcaatggccagctggccgagatcgcctctgtgtgggaggagatg
aaggagaccctgcgggcgcgtgaagagtcgctcggcgaggcgtccaagctgcagggcttc
ctgcgcgacctcgacgacttccaggcgtggctgtcgcgcacgcagacggccatcgcgtcc
gaggacatgcccaacacgctggccgaggccgagaagctgctggcgcagcacgaggccatc
aagaacgagatccgcaactacgaggaggactaccagaagatgcgcgacatgggcgagatg
gtgacgcgcggtcagacggacgcccagtacatgttcctgcaccagcggctgcaggcgctc
gacactggctggaacgagctgcacaagatgtgggagaaccggcagaacctgctgtcgcag
tcgcacgcctaccagctgttcctcagggacaccaagcaggccgaggccttcctcaacaac
caggagtacgttctggcccacacagagatgcccaccactctggagggggcagaggcggcc
atcaagaagcaggaggacttcatgaccaccatggacgccaacgaggacaagatcaacggc
gtggtggaggccggccggcggctggccagcgacggcaacatcaacgccgagaagatccag
gagagggtgacgtccatcgacgacaggcataagaagaaccgtgaggccgctgtggagctg
ctgatgagactgaaggacaacagagacctgcagaagttcctgcaggactgccaggagctg
aacctgtggatcaacgagaagatgctgaccgcccaggacatgacgtatgacgaggcgcgt
aacctgcacagcaagtggctcaagcaccaggccttcatggccgagctgcagtccaacaag
gagtggctggacaagatcgacaaggaggggcagcagctggtggcagagaagcctgagact
gaggcagtggtcagggagaagctggcctcgctgcagaagcagtgggaggagctggagtcc
actacgcagaccaaggcccagtgcctgttcgacgctaacaaggccgagctgttcacgcag
agctgcgccgacctggacaagtggctggccggcctggagggccagatacagtcggacgac
tacggcaaggacctgaccagcgtcaacatcctgctcaagaagcagcagatgctggagagc
caggtggaggtgcgccagcgcgaggtggtggagctgcagtcccaggcggtcgccctcagc
caagagggtcgggacacggaggaggtggacggtcagcggcaggtggtcgagcagaagttc
tcggagctgctggacccgctgaggaagaggaagaacatgctcatggtctcactggagatc
caccagttcaaccgcgacgtggaggacgagatcctctgggttgaagagagaatgcccatc
gccatgtccactgaccacgggcacaacctgcagacagtccagctactcatcaagaagaac
cagacccttcaaaaggagatccagggtcaccaggtgcgcttcgacgacatcttcgagcgc
agccagagcctggtgggcgacgagagccccagcgcggagggcatccgcgctcgcctcgcc
gagctgcaggacctgtgggcgcggctggcagacgagacggccaagcgccacggccgcctg
gaggaggcgcacaaggcccagcagtactacttcgacgccgccgaggccgaggcctggatg
agcgagcaggagctctacatgatgtccgaggagaaggccaaggatgagcagagttcggtg
gccatgttgaagaagcaccagatcctggagcaggcagtggaggactatgcagaggccgtc
caccagctgtccaagaccagcagggggctggtggccgcgggacacccagaaagtgagagg
ataggtatgcgtcagtcgcaggtggataagttgtacgcgggtctgaaggatctgtcggaa
gagaggagggggaagttggacgagaggttccgtctgttccagctcaaccgcgaggtggac
gatctggagcagtggatcgcagagagggaggtggtggccggctcgcacgagctgggtcag
gactacgagcatgtcacgatgctgcaggagcgcttccgcgagttcgcccgcgacacaggc
accatcggtcaggagcgcgtggacagcgtcaaccgcatggcagacgagctgatcaacgcg
gggcacaccgacgccgccacggtggccgagtggaaggacggcctgaacgaggcgtgggcc
gacctgctggagctgatcgacacgcgcacgcagatcctggccgcctcgtacgagctgcac
aagttctaccacgacgccaaggagatcctcggccgcgtgctggacaaacacaagcggctg
cccgaggagctcggacgcgaccagaacaccgtggagacgctgcagcgcatgcacacggcc
tttgagcacgacatccaagccctggggacgcaggtgaagcagctccaggaggacgcggcc
cgtctgcagtcggcgtacgccggcgacaaggccgacgacatccagcggcgcgagggcgag
gtgctggaggcgtggcggtgccttctggaagcgtgcgacgggcggcgcgtgcgccttctc
gacaccggcgacaagttccgcttcttcagcatggtgcgcgacctcatgctgtggatggag
gacgtcatccgcctcatcgaggcccaggagaagcccagggatgtctcctctgtggagctc
ctgatgaacaaccaccagggcatcaaggccgagatcgacgcccgtaacgacagcttcact
gcctgcatcgagctgggcaagtccctgttggcgcgcaagcactacgcatcagaagagatt
aaagaaaagttgctacagttgacggacaagaggaaagacatgattgacaagtgggaggac
agatgggagtggctaagattgattttggaggtgcaccagttctctcgggacgcaggggta
gcggaggcgtggctgctgggtcaggagccctacctgtcggccggctccatgggccagagc
gtggacgaggtggagaagctcatcaagcgccacgaggccttcgagaagtccgccgccacc
tgggaggagcgcttctcagcgctggagagactgactacgctggaattattggaagtgaga
agacagcaagaggaagaggagaggaggaggagacccccgactccagagccgctggtggag
cacggagaggtgcagagggaaggagagcaagtgactcagaacggactgccgtcggatcag
gattcaccacgggacggaggtgagatagtgaacggcgtggccgagcggagctccaaggag
cccagccccatcccgtcgcccacctccgatcggcgggccaaggggggcagccaggcctcc
acgctgccggccaagggccaggactcacccgccgcccagctggagggcctgctgcaccgc
aagcacgagtgggagggacacaacaagaaggcctccaaccggtcttggcataacgtctac
tgtgtgatcaacaaccaagagatgggcttctacaaggacaataagaacgccagtcagggc
atcccctaccacaacgagatccccgtcagcctgagggaggccgtgtgcgaagtggccacc
gactacaagaagaagaaacacgtcttcaaactcaaggttacggatggtaacgagtatctc
ttccaagccaaagacgatgaggagatgaacacatggatccaggccatccagaacgccagc
atgggctctgcctcctccgacaagtcggagatcacgcccagcagcaaccagagcaccccg
gcaaccagccgcgctcaaacactgccggcgaccgtcaccctgacaacggagtcgagcccg
ggcaagcgcgagaaagacaaggagaaggacaaagaaaaacgctttagcctcttcagcaag
aagaagcagtag
DBGET
integrated database retrieval system
