Alosa sapidissima (American shad): 121718531
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Entry
121718531 CDS
T11137
Name
(RefSeq) son of sevenless homolog 1-like isoform X1
KO
K03099
son of sevenless
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04010
MAPK signaling pathway
asad04012
ErbB signaling pathway
asad04068
FoxO signaling pathway
asad04150
mTOR signaling pathway
asad04510
Focal adhesion
asad04540
Gap junction
asad04810
Regulation of actin cytoskeleton
asad04910
Insulin signaling pathway
asad04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121718531
04012 ErbB signaling pathway
121718531
04068 FoxO signaling pathway
121718531
04150 mTOR signaling pathway
121718531
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121718531
04540 Gap junction
121718531
09142 Cell motility
04810 Regulation of actin cytoskeleton
121718531
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121718531
04912 GnRH signaling pathway
121718531
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RhoGEF
SOS1_NGEF_PH
PH
PH_19
PH_10
RHG20_PH
DUF6018
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
121718531
NCBI-ProteinID:
XP_041959474
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Position
9:698641..748564
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AA seq
1335 aa
AA seq
DB search
MQAAQLQYDFFSEDNAPKWRGLLVPSLNKVLSQVHPKLSSQEEALQYIEELILLLLNMLC
QAQPRTVQDVAERVQKSFPHPIDKWAIADAQAAIEKRKRRNPLALPVDKIHPLLKEVLGY
KIDHQVSVYIVAVLEYISADILKLAGNYVRNIRHYEISQQDITVAMCADKVLMDMFHQDE
EDISVFPLIDEEPSSSEEQTYYDLVKAFMAEVRQYLRDLNLIIKVFREPFASNTMLFSLH
DVENIFSRIVDIHEVTVKLLGLIEDTVEMTDEGSPHPLVGSCFEDLAEELAFDPYESFAQ
DILRSGFHDHFLSQLSKPGAAFYLQSICEGFKEAVQYVLPRLLLTPVYHCLHHFEILKQL
EEKSEDEEDKECLKQAITALLNLQSSMERICSKSLAKRRLSESACRFYSQQMKGKHLAIK
KMNEIQKNIDGWEGKDIGQCCNEFIMEGALTRVGAKHERHIFLFDGLMICCKSNHGQPRL
PGASTAEYRLKEKFFMRKVQINDKDDKEGEYRHAFEIILKDGNSVVFAAKSAEEKNGWMA
ALISLQYRSTLERMLDSAMMQEEKEEQMRLPGAEVYRFAEPDSEENLVFEENVQAKSGIP
IIKAGTVLKLIERLTFHMYADPNFVRTFLTTYRSFCKPQELLDLLIERFDIPEPKPTEAD
QMALENGDQPLSAELKRFRKEFVQPVQLRVLNVCRHWVEHHFYDFERDPQLLRRLEEFIG
TVRGKAMRKWVESITKIIQRKKQVQANGPSHNITFESPPPPIEWHISKPGQIDQFDLMTL
HPIEIARQLTLLESDFYRSVQPSELVGSVWTKEDKELNSPNLLRMIRHTTNLTLWFEKCI
VETENLEERALVVARIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQRK
ILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTEEGNPDFLKRHGKELINFS
KRRKVAEITGEIQQYQNQPYCLRVENDIRKFFENLNPMEDKMEKEFTDYLFNKSLEIEPR
NARTLPRFPKKYNCPLKSPGTRVTSVRPGTMRHPTPLQNEPRKISYSRIPDSEMEGAASA
PNSPRTPLTPPPASAASSSTDICSVFDSPQGPSSPFHSNCDSIFAPVSLPHGPRSSSVSS
MVYRSTEDAPVPPPVPPRRRPESAPAESSPSKMMSKHLDSPPAVPPRQPTTKVYSPRYSL
PERTSVSDAPDSPPTLPPREPVRTPDVFSSSPLHLQPPPQGRRAGPDVGQTFFPPNSPFS
PLPPQTPSPLGPRKQLASTQLDYEAVTGPPGPPIPPRQSTAQTIPKLPPKTYKRDPAHSS
LQRDGLPLLENVNPS
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcggcacagctacagtacgactttttcagcgaggacaacgcaccgaaatggcgg
gggctgctggtaccttctttaaacaaggtcctgagccaggtacaccctaagctgtcatcc
caagaggaggctctgcagtacattgaggagttgatcctgttacttctaaacatgctctgt
caggcacagccacgcactgtgcaggatgtggcagaacgtgtacagaagagttttccccac
cccatagataaatgggctattgctgatgcccaggctgccattgagaagaggaagaggaga
aatcctcttgccttaccagtggataaaatccaccctttactcaaggaggtacttggttat
aaaatagaccatcaggtgtctgtgtacatcgtagctgtgcttgagtacatctctgctgat
atcctgaaactagctgggaactatgtacgcaacattcgtcactatgagatctcccagcag
gacatcactgtggccatgtgtgcagacaaggtgctgatggatatgttccaccaagacgaa
gaggacattagtgtcttccccctgatagatgaagagccgtcatcatccgaagagcagact
tactatgacctggtcaaagctttcatggcagaagttcgtcagtaccttcgtgacctcaat
ctcatcattaaggtgttccgcgagcccttcgcatccaacaccatgcttttctcactccat
gatgtggagaacattttcagtcgtattgtggatatccatgaggttactgtgaagctgttg
gggttgatagaggacacagttgaaatgaccgatgagggtagcccacaccctctggtgggc
agctgctttgaggacctcgctgaggagctggcttttgacccctacgagtcttttgctcag
gacatcctgcggagtggcttccatgatcacttcctgagccagctctctaagcctggggct
gcattttaccttcagtctatctgtgaaggctttaaggaagctgtccagtatgtcctacct
cgcttgctgctaacccctgtgtaccattgcctccatcactttgagatcttaaagcaactg
gaggagaaaagtgaggatgaggaggataaagagtgtctgaagcaggccatcactgcattg
ctgaatctccagagcagcatggagagaatctgttccaaaagcctcgctaaaagaaggctg
agcgaatcggcctgccgcttctacagccagcagatgaagggcaagcacctggccatcaag
aaaatgaacgaaatccagaagaacatcgatggctgggaaggcaaagacattggtcagtgc
tgcaatgagttcatcatggagggagctttgacgcgggtgggtgccaaacacgagcgtcac
attttcctgtttgatggcctaatgatctgctgtaaatccaaccatggacagccgcggctt
ccaggtgctagcactgctgaatatcgcctcaaagagaagttcttcatgcgcaaggtgcag
atcaatgacaaggatgacaaggagggcgagtaccgccacgcctttgaaatcatcttgaag
gatggcaacagtgtagttttcgccgctaagtcagctgaggagaagaatggctggatggcg
gctctaatctcactgcagtatcgttccacattggaacgcatgctggactctgcaatgatg
caggaggagaaggaggagcagatgcgcttgcctggggctgaggtataccgctttgctgag
ccagactcagaagagaatctggtgtttgaggaaaatgtgcaggccaagtcgggcatcccc
atcatcaaggctggcacagtgctgaaactcattgaaagactcaccttccacatgtatgca
gaccccaattttgtgaggaccttcctgacaacatacaggtcattctgcaaaccacaggag
ctacttgatctgctaatagagaggtttgacatccctgagccaaagcccactgaggcagat
cagatggccttagagaatggagaccagcccctgagtgcagaactgaaacgattccgcaag
gagtttgttcagcctgtacaactgagggttctgaatgtatgtaggcactgggtggaacac
cacttctatgactttgagagggatcctcagctacttcgacgcctagaggagtttattggc
acagttcgagggaaggcaatgaggaaatgggtagaatccattactaagatcatccagcga
aagaagcaggttcaggctaatgggccaagccacaacatcacctttgagagtccacctcct
cccattgagtggcacatcagtaagcctggccagattgatcagtttgacctcatgactcta
caccccattgagattgctcgacaactcactctcctggagtctgacttctataggtctgtc
caaccgtcagagctggtgggcagtgtgtggaccaaagaggacaaggagttgaactcacct
aatctacttcgcatgatccgtcacaccaccaatctcacactctggtttgaaaagtgtata
gtggagacggagaacttggaagagcgtgcactagtagtggcacgcattattgaaattctg
caggttttccaagaactcaataacttcaacggtgtactggaggtggtcagcgccatgaac
tcctccccagtctaccgactggaccacacatttgagcaaatcccaagtaggcaacggaag
attctggaggaggcccatgagctgagtgaagatcattacaagaagtaccttgccaaactg
cggtcaatcaacccaccctgtgtgcccttttttgggatctatctgacgaacatcctgaaa
acagaggagggtaatcctgatttcctaaaaagacatggaaaggagctgatcaactttagc
aagcgaaggaaagttgcagaaatcacaggagaaatccaacagtatcagaaccagccctac
tgtcttcgtgtggagaatgatatacggaaattctttgaaaacctcaatcccatggaggat
aaaatggagaaagaatttacagactatctttttaacaaatctctggagattgagcctcgc
aatgcccgtactctgccacgatttccaaagaagtacaactgcccactgaagtcccctggt
acacgggttacctcagttcggccagggaccatgcgccatcccacccccctacagaatgag
ccacgcaagatcagctacagtcgcatacctgacagcgagatggagggtgctgcctccgcg
cccaactccccccgcacaccactcacaccgccacctgcctcagctgcctcaagcagtacc
gacatctgcagtgtatttgactcaccacaaggaccctcaagccccttccattccaactgc
gacagcatctttgccccggtctctctcccccacggcccacgatcatcgtccgtttcctcc
atggtgtataggagtacagaagatgctccagtgccaccacccgttccccctcgcagacgt
cccgagtcagctcctgccgaatcatctccctcaaagatgatgtcaaagcacttggacagt
cctccagctgttcccccccggcagcctaccactaaggtgtattctccacgttattctctg
ccagaacgcacctctgtttcagatgctccagacagcccacctacgctgcccccaagggag
ccggtcagaacgccggacgtcttctctagctccccattgcatttgcagccgccacctcag
ggccgccgggcaggacccgacgtgggccaaacctttttcccccctaattcccccttcagt
cctctaccccctcagacgccatcgccgctaggaccccgcaaacaactggcctccacccaa
ctagactatgaagctgtaacaggccccccaggaccaccaattcctcccaggcagagcacc
gctcagaccatccccaaactaccccccaaaacctataaaagggacccagcccactcttca
ttgcaacgggatggcctccctttactggagaatgtcaacccctcttag
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