KEGG   Alosa sapidissima (American shad): 121718588
Entry
121718588         CDS       T11137                                 
Symbol
ears2
Name
(RefSeq) probable glutamate--tRNA ligase, mitochondrial
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad00860  Porphyrin metabolism
asad00970  Aminoacyl-tRNA biosynthesis
asad01100  Metabolic pathways
asad01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:asad00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    121718588 (ears2)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    121718588 (ears2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:asad01007]
    121718588 (ears2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:asad03016]
    121718588 (ears2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:asad02048]
    121718588 (ears2)
Enzymes [BR:asad01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     121718588 (ears2)
Amino acid related enzymes [BR:asad01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   121718588 (ears2)
Transfer RNA biogenesis [BR:asad03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    121718588 (ears2)
 Prokaryotic type
   Other AARSs
    121718588 (ears2)
Prokaryotic defense system [BR:asad02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    121718588 (ears2)
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 121718588
NCBI-ProteinID: XP_041959576
LinkDB
Position
9:18122446..18136216
AA seq 568 aa
MVLSSLITCALPYTPAKHRGTLLKLCKHCKWTVPGRSGHQFVGTKGVYRRDQRGLRCPPI
SGDCEIDLHWKRHYSADHGQVRVRFAPSPTGFLHLGGLRTALYNYLFAKKYGGSFVLRME
DTDQNRLVPGAADAIEDMLEWAGIPPDESPRVGGPVGPYLQSQRLGLYSEAAQTLLESGH
AYRCFCSAQRLELLKKEALRSGETPRYDNRCRHLQPAQLADRLSRGTPHVIRFRLEPGAE
PFQDLVFGRNRHEVSAVEGDPVLMKADGFPTYHLANVVDDRHMGVTHVLRGAEWLISTSK
HLLLYRALGWTPPAFGHLPLLLNRDGAKLSKRQGDIFVQSFARRGVLPEALLDIVTNCGS
GFEGNRMGRNLDELIAEFNESKITTHSALLDLDKLPEFNRIHLLQRIDDVERCCHLVEEL
REHIIQTFGPQIQEKDVLDEDYIQRVLHLRKGHISSVRELVTPTYAYLWIRPLVARQQLD
ELTSESATIAMLVIELMEAGRGKALTTDWLGAELKTMAKKVKSTKYSTVMKLLRLALSGQ
QQGPSVAEMMVSLGSGETCQRLQRVLQH
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggtcctgtcatcgctcataacgtgtgcgttaccttacacaccagcaaagcaccgcggc
actttactgaaactttgtaaacactgcaagtggacagttcccgggcgatctggtcatcag
ttcgtgggaacgaaaggagtttatcgacgtgatcagcggggactgcggtgtccgcccatc
agcggtgactgtgagatagaccttcattggaaaagacattactctgctgatcacggacag
gttcgggtgaggtttgcgccaagtccaaccggcttccttcatttaggagggcttcgcaca
gcactatacaactacctctttgccaagaaatatggcgggagcttcgtcctgcgaatggag
gacacagaccagaacagactggtacctggagcggcagatgctattgaggacatgttagaa
tgggcagggatccctcccgatgagagtccgcgggttggtggccctgtcgggccgtacctg
cagtcccagcggctgggtctgtactcggaggcggcccagacgctgctggaatcgggccac
gcgtaccgctgcttctgctccgcccagcggctggagctgctcaagaaggaggcgctcagg
agcggagagacgccgcggtatgacaaccgctgccgccaccttcagccggcccagctcgcc
gaccgcctgtctcgtggcacaccgcacgtgatccgcttccgcctggagcccggcgccgag
cccttccaggacctggtgtttggccgcaaccgccacgaggtgtctgcggtggagggcgac
ccggtactgatgaaggccgacggcttccccacctaccacctggccaacgtggtggacgac
cggcacatgggcgtgacgcatgtgctccgtggcgccgagtggctcatctccacgtccaag
cacctgctgctgtaccgggcgctggggtggacgccgcccgcgttcgggcacctgccgctg
ctgctgaaccgcgacggcgccaagctgtccaagcggcagggcgacatcttcgtccagagc
ttcgcccgccgcggggtgctgcccgaggcgctgctggacattgtgaccaactgtggctcg
gggttcgaaggcaaccgcatgggacgtaaccttgatgagctcatcgcggagttcaacgag
tccaagatcaccactcactcggcccttctggatctggacaaactaccagagttcaacagg
atccacctcttgcagagaatagacgatgtggaacgttgttgccacctagtggaggaattg
agggagcacatcatccaaacgtttggcccacagatccaggagaaggatgtcctggacgag
gactacatccagagggtccttcacctcagaaagggtcacatctcctctgtgcgtgagctg
gtgacccccacctatgcctatctttggatcaggccattggtcgcccggcagcagctggac
gagctgacgtccgagtcggcgaccatcgctatgctggtgatcgaattgatggaggcaggc
cgtgggaaagccctgaccacggactggctaggcgctgagctgaagactatggccaagaag
gttaagtccaccaagtacagcactgtgatgaagctcctcagactcgcccttagcggacag
cagcaaggaccaagtgttgctgaaatgatggtatctttaggaagtggagaaacctgccaa
cgtctgcaaagagtgctgcaacactga

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