Alosa sapidissima (American shad): 121718622
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Entry
121718622 CDS
T11137
Symbol
otx2a
Name
(RefSeq) homeobox protein OTX1 A
KO
K09326
homeobox protein OTX1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121718622 (otx2a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121718622 (otx2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
TF_Otx
SatD
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121718622
NCBI-ProteinID:
XP_041959633
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Position
9
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AA seq
380 aa
AA seq
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MMSYLKQAPYGMNGLGLGGSMDLLHPSVYPAHPRKQRRERTTFTRTQLDILESLFSKTRY
PDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQTGTNSKIRPAKKKPSPSRESPGSE
SSGQFTPPAVSSTGSSSSSSSSSSSGSHPSGLGGVGLGGGGGVSSVTSGATPVSAIWSPA
PISPLPAPPSVPDAAPPTSASCMQRPVSSSGSSSGGGTPAYPVSYSQTPAYSQGYSAAAA
AAAASGSYFGGMDPSSYLAPMHSHHHPHTAHHPHHASTHPQLGSMSSSGMSSHHPHHHIG
QSTSHPHHAHHAHHAHHHQGYGASGLGFGSTDCLDYKEQTTTAAAAAAAAAAASSWKLNF
SAPADCLDYKDQAAWRFQVL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaagcaagccccgtacggcatgaatggcctggggctcgggggttcc
atggatctcctgcatccgtctgtgtacccggcccatccgcggaaacagcggcgggagaga
actacttttacgcgcacgcaactggacattttggagtctctcttttccaaaacgcgttac
ccagacatcttcatgagggaggaggtggcgctgaaaattaatttaccggagtcacgagta
caggtgtggttcaaaaaccggagggccaagtgtcgccagcagcagcagactggaaccaac
tccaagatccggccggccaagaagaagccctcaccgtccagggagagcccgggctcagag
agcagcggtcagttcacccctccggccgtctccagcaccggctcctcttcctcctcctcc
tcctcctcctcctctggctctcacccgtctggcctgggcggcgtgggtttgggcggtggc
ggcggcgtgtcctcagtgacctcaggtgccaccccggtgtcggccatctggagcccggcg
cccatctcgccgctccctgcgccaccctccgtgccggacgccgcgccaccgaccagcgcg
tcctgcatgcagcggcctgtgtccagctcgggctcctctagcggaggggggacccccgcc
tacccggtgtcctacagccagacccccgcctacagccagggctactctgccgcggcggcc
gctgctgccgcctctgggtcctactttgggggcatggaccccagctcatacctggccccc
atgcactcccaccaccacccacacacggctcaccacccccaccacgccagcacgcacccc
cagttgggctctatgtccagctccggcatgtccagccaccatccgcaccaccacataggg
cagagcaccagccacccccaccacgcgcatcacgcgcaccacgcgcatcaccatcagggc
tatggcgccagcggcctcggattcggctccacagactgtttggactataaggagcagacg
acaacggccgctgccgccgccgctgccgcggccgccgcgtcctcatggaaactgaacttc
agcgcgcccgcggactgcttggactacaaggaccaagccgcgtggagatttcaggtgctg
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