Alosa sapidissima (American shad): 121718767
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Entry
121718767 CDS
T11137
Symbol
ncapd3
Name
(RefSeq) condensin-2 complex subunit D3 isoform X1
KO
K11491
condensin-2 complex subunit D3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121718767 (ncapd3)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
121718767 (ncapd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
PDS5
HEAT
Cohesin_HEAT
HEAT_2
Adaptin_N
Cnd3
HEAT_EF3_N
Bac_export_3
UNC45-central
Motif
Other DBs
NCBI-GeneID:
121718767
NCBI-ProteinID:
XP_041959860
LinkDB
All DBs
Position
1:complement(36529758..36544064)
Genome browser
AA seq
1399 aa
AA seq
DB search
MELDALELLKLRDVPKAWVDAVWEAEFCDAEKLDSVIEEKITEGGIHVFKTVQTQLLPFS
NDITENTQNVWVLMKENEISVKALVAVISHFIFEGKSKTSNVEEKLHALQAASLYLLLLR
IPGSVANQVFHQILFESSLGLIQKCWPKDSSGKKRKKDPPSNSQGKSKGRKRAKSQTKNQ
NEMDDEDEENDDMDMETSFSARELLQIRNEIESLVKTLLHLLKNGSLQCRPECVTECVQI
LTELTHFEAAVEEISFSDSVGINRMKTLPELAYHGLWILCSSRAAGDTCLRSVFGRLLYV
ILMMSKDDMRSKPTLLLQSQVVLAARDQALRFVSHVVDELKDAAMPVLYILAQHICDKMV
EKVDYRTKGAQAVGQLVAKMPPAKRANFIQWLYSYSLKPQIPYRLFALDVVMVLLEEVDD
EEVSEQEEAPQEEGRSEFLTRRFLVQTLVFGRSCDVSPTVRAHALHCLSRCLDMQSQNTT
RYVQELFQATGVETRSLLEMEGSEGTVNTHYGVSTFRTIQNTNVNTAIGDSSTPLARDTL
DLLKQRVSDAKTNVRKAALEAITGLLKHSVIACNKEHMALLSERCRDSSIMVKKKAMQSL
TDLLIACPERKLVLVAWLRGVVVSVMDTETSVQDKALELLDLIILQHIKEPRHFADTAQR
LAWDLLSLMCDECADLGCYFRKAFRIWSRQNKFSSGFVNTLIKHTETEHASVAWMLLSKV
SGGASGLHLETILNKWDDMLASKEVRGDTTCHILTVIGLIAEHINDVTRERIVEEVKALL
GSCVMPTDVIHAGVEALSRLGRAEHKEVPAFQAFMNKHCGELVAICQKYLSSVVLKVKAA
ENIDTDIVVRHLYTLGMASLHCPERVGERNFALVLSFLTSAVELQPDGATELPGSQPLSQ
FKLTPMPSVVRAHAVITLGQLCLQHEQLAHRCLPAFARELEVGQHMTVRSNVVVVLCDLC
VRYTNMATLYVPNISACLADPVSEVREKTLIMLTNLLQEEFLKWKDSLFFRYASVLADPV
HEIVSLCEYCLVDRLLKKNPQMFYQHFVECIVHFNSYDKHSKYNKFPQTEREKALFSLKG
QLKQGKRFRIYKFLLKHFTDEQRFNTTNRISKEILAGFVDQTLPLDEDGAALLSDSFDVL
SLKELKLSASTAAEGADEPQDEQAMMVKTMQKKLISHAQKKNFMENVIPIVLGLKNLLEE
KRSPVLGNLMRYLRVITEDYRAELKELFAADAQLAEELEFGLKQYQKQQEDDELELQLQR
LNFSRNTPQPANRKSHRGPRASAPSGEGFTPVLTPASVPSSIKPIAPPRRFEGRETSDAQ
LSANTSVSTVEHRDVGRAISTPQVGLHELTFGGCVSAIRYRKAPARHQEEESDVFHVTLG
EETPKQWNIQSPLRKTPIR
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggagttggacgccttggagttattgaaattaagagatgttccgaaagcttgggtggac
gcagtatgggaagcggaattctgtgacgctgaaaaactggactctgttattgaggaaaaa
ataacagagggaggaatacatgtcttcaaaactgtacagactcaactgcttccgttttca
aatgacatcacagaaaatacacagaatgtctgggtcttgatgaaagaaaatgaaatctct
gtcaaagctcttgtggcagtaatttcccatttcatctttgagggaaagtcaaaaacctct
aatgtagaggagaagcttcatgcgttgcaagcagcctcactttatctgctgcttttgagg
attcctggtagtgtagccaatcaagtttttcaccaaattctgtttgagagctcccttgga
ctcatccagaagtgttggccaaaggactcctctggaaagaagcgcaagaaagacccccca
agtaactcccaaggcaaatcaaagggacggaaacgtgccaagtctcaaacaaagaaccaa
aatgagatggatgatgaggacgaagagaatgatgatatggacatggaaacctcgttttct
gctcgagagctgttgcaaatacgaaacgaaatcgaatctctggtgaaaactttgcttcac
ctcctgaagaatggttctcttcagtgcaggcccgagtgtgtcactgagtgtgtgcagatt
ttgactgagctcactcattttgaggcagctgttgaagagatctcattttcagattcagtg
ggaatcaaccgcatgaagaccctgccagagctggcctatcatggactgtggattctctgc
tccagccgtgcagctggagacacgtgtctgaggtcagtgttcggccggcttctctacgta
attctcatgatgagcaaagatgacatgcgctccaagccgaccctgcttttgcagtcgcag
gtggttcttgctgccagggatcaggccctccgttttgtcagccatgttgttgatgagctg
aaggatgctgccatgccagtgctctacatcttggctcagcacatttgtgacaagatggtg
gagaaagtggactaccgaaccaaaggagcccaagctgtggggcagctggtggctaagatg
cctccagccaagcgtgccaatttcatccagtggctgtacagctactctctgaaaccacag
atcccatatcggctgtttgcgctggacgttgtcatggtgctgctggaggaggtagacgac
gaggaggtgtctgagcaggaggaggcgccccaggaggagggacggtcggagttcctgaca
cgccgcttcctggtgcagacgctggtgtttggccgcagctgtgacgtgtcgcccaccgtc
cgggctcacgctctgcactgtctctcccgctgcctggacatgcagtcccagaacaccacc
cgatatgtacaggagctcttccaagccactggtgtggagaccaggagcctcttggagatg
gagggaagtgaaggcactgtgaacacccactatggcgtctccaccttcaggacaattcaa
aacaccaatgtcaacacggcaattggcgatagctctactcccttagctcgggacaccttg
gatctgttaaagcagcgtgtgtcagatgccaagactaacgtcagaaaagctgctttggag
gccattacaggtttgctgaagcacagcgtgatcgcatgcaataaggagcacatggccctg
ctgtctgagcgttgtagagactcctccatcatggtgaagaagaaggccatgcagtctctg
actgacctgctcattgcgtgtccggagcgtaagctggtgctggtggcctggctgcgtggt
gtggtggtgtcggtgatggacacggagacgtctgtgcaggacaaggccctggagctgctg
gacctcatcatcctgcagcacatcaaggagccgcgccacttcgctgacactgcccagagg
ctggcctgggacctgctgagtctcatgtgtgacgagtgtgctgacctcggatgttacttc
cgcaaagccttccgcatttggtcccgacagaacaagttctcctctgggtttgtgaacacg
ctcatcaagcacacggagacggagcacgcctctgttgcctggatgctgctgtccaaagtg
tccggcggagcctctggcctccacttggagactatcctgaacaaatgggacgacatgctt
gcgagtaaggaggtgaggggagacaccacttgccacatcctgaccgtgattggcctcatt
gctgaacacattaatgatgtcaccagggagaggattgtggaggaggtgaaagcattgctg
ggcagctgtgtgatgcccactgatgtcattcatgccggggtggaggcactgagcaggctg
ggccgtgctgaacataaagaggtgcctgcattccaggcctttatgaataagcactgtggt
gagcttgtagccatctgtcaaaagtatttatccagcgtcgttctgaaagtcaaagcagca
gagaacattgatacagatattgtggtgaggcacctgtacacgctggggatggcgtccctg
cactgccctgagcgagtgggggagcggaactttgctctcgtgctctccttcctcacctcg
gcggtggagctacagccagatggcgctacagagctgcctggtagtcagccgctgtctcag
ttcaaactgacccccatgccgtctgtggtgcgagctcatgcggtcattaccttaggccag
ctgtgtctccagcatgagcagctggcccaccgctgcctgccagccttcgcccgtgagctg
gaggtgggccagcacatgacggtccggagcaatgtggtggtggtgctgtgtgacttgtgc
gtgcgctacaccaacatggccaccctctacgtccccaacatctccgcctgccttgctgac
cccgtgtctgaggtccgggaaaagaccctcatcatgctcaccaacctgctacaggaagag
tttcttaagtggaaggactctctcttcttccgctatgcatcggtacttgctgatcctgtc
catgagattgtgagtctgtgtgagtactgtttggtggatcggcttctgaagaaaaaccca
cagatgttctatcagcactttgttgagtgcattgtccactttaactcctatgacaagcac
agcaaatacaacaagttcccccagactgaaagagagaaggctctgttctcactcaaggga
cagttaaaacaaggcaagcgattcagaatctacaagttcctgttgaagcactttactgat
gaacagcgcttcaacaccacaaacagaatcagcaaggagatcctggctggttttgtggac
cagacgttgcccctagatgaggacggcgccgcgttgctgtctgattcttttgacgttttg
agtttgaaggagctgaagctgtctgcctccactgcagcagagggtgctgatgagcctcaa
gacgagcaggccatgatggtcaagaccatgcagaagaagctcatctcacatgcccagaag
aagaacttcatggagaacgtcattcccattgtgctggggcttaagaacttgctggaggag
aagcgttcacccgtgctgggcaacctaatgcgctatctacgggtgatcacagaggactac
cgggccgagctgaaggagctgtttgcagcagacgcgcagcttgctgaggagctggagttc
ggtctgaagcagtaccagaagcagcaggaggacgacgagctggagctgcagctgcagcgc
ctcaacttcagcaggaacaccccgcagcctgcaaaccgtaaaagtcatcgtggcccacgt
gcctcagcaccgtctggtgaaggcttcactcctgttctcactcctgcctctgttccatcc
agcatcaaacccattgctccaccaaggcgttttgagggtagggagaccagtgatgcacag
ctgtcagccaacacgtctgtttcaacagtagagcacagagatgttggaagagccatcagc
actccacaagtgggcttgcatgagttgacatttggtggatgtgtcagtgccatcagatat
cgcaaagctccagcgagacaccaagaagaagagagtgatgtcttccatgtgactcttggg
gaagagaccccaaagcaatggaatatccagtcacctctgcggaaaacccccattcgttaa
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