Alosa sapidissima (American shad): 121718801
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Entry
121718801 CDS
T11137
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04020
Calcium signaling pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121718801 (grin2ab)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121718801 (grin2ab)
04082 Neuroactive ligand signaling
121718801 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121718801 (grin2ab)
Ion channels [BR:
asad04040
]
Ligand-gated channels
Glutamate (ionotropic)
121718801 (grin2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
121718801
NCBI-ProteinID:
XP_041959952
LinkDB
All DBs
Position
9:36996036..37088352
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AA seq
1524 aa
AA seq
DB search
MMGEAAVLRVRLLCVCVCVCACVCASLAAQRPAALQVAVILGQSRPASSSSSSSSSSWET
ELMTRAGRVAGGDGRVEAQVSAVRLNRTDPRSVLSGLCEVMGRQPLHGLVFGDDGDQEAL
AQLLDFVSAHTLMPILGIHGGSAMTMAQKDIKSSFFQFSASLQQEALLMLSIMEEYDWHV
FSIVTSKFPGYLDFIATLRTTVDHSFVRWDLQSVVILEGTDAEAKAHVELKRLQSPVILL
YCSKEEAQFILAEGRSLGLTGAGYVWIVPSLVSGSVEVIPEAFAPGLISVAYDWDYPLDM
RLSDGLGLLVSAASAMHLQTGRIPDATASCHAPSQSGAAEQPKVPPSSLRRYMMDISLDG
RDLSFTDDGYQVNPKLVVMVLNTEREWEKMGRWENNSLRLRFPVWPRYNSWGDPDADEKH
LSIVTLEEKPFVIVDDVDILTGTCMRNSVPCRKHIKDNSTEGSYVKKCCKGFCIDILKKI
SRIVKFTYDLYLVNNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVP
FVETGISVMVSRSNGTVSPSAFLEPFSPSVWVMMFVMLLLVTAIAVFLFEFISPLGFNRN
LAQGKDPHGPSFTIGKAVWLLWGLVFNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTA
NLAAFMIQEEFVDQVTGLSDKKFQSPYSFSPPFRFGTVPNGSTERNIRKNYPDMHQYMVK
YHQTGVHDALISLKTGKLDAFIYDAAVLNYMAGRDDGCKLVTIGSGYVFATTGYGIALQK
GSYWKRLVDLAILGIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAA
MALALITFVWEHLFYWRLRFCLTGRCSGQPGLLFTISRGIWSCIHGVHIELKKPPELGFS
PQQNMLHLLKSAKELVPGRQANPNILPPPPGLLQIMGAAKSNSQAAKDTVYSNTGSLVSN
RLKEPLNNAALLPGQRVLTMTDAPHNLPGGGGGGDKGVSNGASRNPPPAASKPRALWKKS
VETLRQGAPPGSEDPSSAAPAAVSMATAPAAPLESRLPMKSQRYLPEDAPDLSAAEGKGH
GGNGAPGNNNKQVKEPPTLRKRGRLPRDLSDLELSTLRSQQSGSIQSNHTTSGTLHHLFS
QSSQGSGVFTIDSASLDQEPAALHFPDLFSDHHHHRDNGGKASTKGPAGPGQQPILQLNS
SLLSSPPPHLAHAAHPDVMATAVAKEKKYNTYGKPGMGGASGGGGPQTHCRSCLSRLGGS
SGSGGVAGGGYSGLYTVRSPPLRCDACLHSASLYDISEDQLHPNDPPPPPQMPQSPSFTA
YLPQNDPSHPEGGGLISHFQTEEPIRRQHSYENLPGQSGPRRVSLQEASPYANLPPVSPS
PAPPGGLAGMAGVSGLGVGRRSKSLYPLRPSENPFLQTLRDDQRLAHGRSSTDIYKQLVP
LTLGTGMGTGGMTPTSPSPSHVHAHHAHHGHAALLASELFYPEHMMPYVAPPPPLQGTYP
APRAMSAGGARRVYKRMPSIESDV
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgaggcagccgtgctgcgcgtgcgtctgctctgtgtgtgtgtgtgtgtgtgc
gcgtgtgtgtgtgcgagcctggcggcccagcggccggccgcgctgcaggtggcggtcatc
ctgggccagtcgcgtccggcgtcgtcctcctcgtcctcgtcctcctcgtcctgggagacg
gagctgatgacgcgtgcgggccgcgttgccgggggcgacgggcgcgtggaggcccaggtg
tcggccgtgcggctgaaccggaccgatccacggagtgtgctcagtggcctgtgcgaggtg
atgggccggcagccgctgcacggcctagtgttcggagacgacggggaccaggaggccctc
gcccagctgctggacttcgtctccgcccacacgctcatgcccatcctgggcatccacgga
ggctccgccatgaccatggcacagaaggatataaagtcgtcgttcttccagttttcggca
tctctccaacaggaggcgctgttgatgctgtccatcatggaagagtatgactggcatgtc
ttctccatagtaaccagcaagttccctggatacctcgactttatcgccaccctccgcacc
actgtggaccacagcttcgtgcgctgggatctgcagagcgtggtgatcctggagggcacg
gatgcggaggccaaggctcatgtggagctcaagcgactccagtcccctgtcatcctactc
tactgctccaaggaggaggcccagttcatactcgccgagggacgcagcctggggctgacc
ggggccggctacgtctggattgtgcccagcctggtgagtgggagtgtggaggtcatccct
gaggcctttgctccggggctcatctccgtggcgtacgactgggactacccgctggacatg
cggctgagcgacggcctgggcctgctggtctccgccgccagcgccatgcacctccagacc
ggacgcatccccgatgccaccgccagctgccacgcccccagccaatcaggggccgccgag
cagcccaaggtcccgcccagcagcctgcgcagatacatgatggacatctcattagatggt
cgtgacctgtcttttactgacgatggttaccaggtcaaccctaagctggttgtcatggtg
ctcaacacagaaagggaatgggagaagatgggccggtgggagaataactcgttgcgtctg
cggttcccggtgtggccgcggtataactcgtggggcgaccccgacgcggatgagaagcac
ctgagcatcgtcaccctggaggagaagccctttgtgatcgtcgacgacgtggacattctc
accgggacctgcatgaggaactccgtgccctgccgcaagcacatcaaagataactcaacg
gagggctcctatgtgaagaaatgctgtaagggcttctgcatcgacatcctgaagaagatc
tccaggatcgtcaagttcacctacgacctctatctcgtcaacaacggcaagcacggcaag
aagatcaacaacgtctggaacgggatggtcggagaggtggtgtataagaaggcagtcatg
gcggtgggatctctgaccattaatgaggagcgatctgaggtcattgacttctctgtaccc
ttcgtagagaccggcatcagtgtaatggtatcccgtagcaacggaacagtgtcaccctct
gcgtttctggagcccttcagtccttccgtgtgggtgatgatgtttgtgatgctgctcctc
gtcacggcgatagccgttttcctcttcgagttcatcagtccactgggcttcaacagaaac
ctcgctcagggcaaagatccccatggtccgtccttcaccattggcaaagcggtgtggctg
ctgtggggtttggtgttcaataactctgtgccggtgcagaacccgcgcggaaccaccagt
aagttcatcgtgtccgtgtgggccttcttcgccgtcatcttcctggccagctacaccgcc
aacctggccgcctttatgatccaggaggagttcgtcgaccaggtcacaggcctcagtgac
aagaagttccagagcccatactccttctcccctccattccgttttggaacggtaccgaac
gggagcactgagagaaacatcaggaaaaactacccagatatgcaccagtacatggtcaag
taccaccagaccggcgttcatgacgcactcatcagccttaagacagggaagctggatgcg
ttcatctacgacgctgcagttcttaactacatggcgggccgggatgacggctgcaagctc
gtcaccatcggcagcggctacgtgtttgccaccactggctacggcatcgccctacagaag
ggctcctactggaagcgcctggtggacctcgccatcctggggatcatcggcgacggtgag
atggaggagcttgaggcccagtggttgactggtatctgtcacaatgagaaaaacgaggtc
atgagctcgcagctggacatagacaacatggcgggcgtgttctacatgctggcggccgcc
atggctctggcgctcattacgttcgtgtgggaacacctgttctactggaggctacgcttc
tgcctcaccgggcgctgctctggacagcccggcctgctcttcaccatcagcaggggcata
tggagttgtatccacggtgtgcatattgagctgaagaagcctccagagctgggcttcagc
cctcagcagaacatgctgcatctcctcaagtcggccaaggagctggtccccggtcgccag
gccaaccccaacatcctgccgccacccccaggcctgctccagatcatgggcgccgccaag
agcaacagccaggcggccaaggacaccgtctacagcaacaccggcagcctggtcagcaac
cggctcaaggagccgctcaacaacgccgcgctgttgccagggcaacgggtgctgaccatg
accgacgcaccgcacaacctgccgggaggaggagggggtggggacaagggcgtgtccaat
ggggcgtcgcgtaaccctcctcctgccgcgtccaagccccgcgcgctctggaagaagtcg
gtggagacgcttcgccaaggggcgccgccgggctccgaggatccgtcttccgcggcccct
gccgctgtgtccatggcgaccgccccggccgcaccgctggagtcacggctgcccatgaag
agccagcgctacctgcccgaagatgcccccgacctctccgccgcagagggcaaaggtcac
ggaggcaacggcgcccccggcaacaacaacaagcaggtgaaggagccgcccacgctgcgc
aaacgagggcggctgcctcgcgacctcagtgacctcgagctgtcgacgctgcgcagccag
cagagcggcagcatccagagcaaccacaccacctccggaaccctccaccacctcttcagc
cagagcagccagggcagcggagtgttcaccatagactccgcctccctcgaccaggagcct
gccgccctgcacttccccgacctcttcagcgaccaccaccatcaccgcgacaacggcggc
aaggccagcaccaagggcccggcgggacccggccagcagccaatcctgcagctgaacagc
agcctgctctccagcccgcccccacacctggctcacgccgcccaccccgacgtcatggcg
acggccgtggcgaaggagaagaagtacaacacctacgggaagccggggatgggcggggcc
tctggcggcggcggacctcagacccactgccgcagctgcctgtctcgcctcgggggctcg
tccgggagcggtggcgtcgcaggtggcggctactcggggctgtacacggtccgttcgcca
ccgctgcgctgcgacgcctgcctgcattccgccagcctctacgacatcagcgaggaccag
ctgcaccccaacgaccccccccctcctccgcagatgccccagtcgccctcctttacggcc
tatctgccccagaacgacccgtcgcaccccgagggcggtggcctcatcagccacttccag
acggaggagccaatccggcgccagcactcctacgagaacctgccagggcagagtgggccg
cgccgcgtcagtctgcaggaggctagcccctacgccaacctgcccccggtgtccccctct
ccggcgccccccggtggcctggctggcatggcgggcgtgagcgggctgggcgtgggccgc
cggagcaagtcgctgtacccgctgcgcccgtcagagaacccgttcctgcagacgctgcgt
gacgaccagcggttggcccacggccgcagctccacggacatctacaagcagctggtgccg
ctcacattaggcacgggcatgggcacgggtggcatgacccccacctcgccctcgccctct
cacgtccatgcccaccacgcccaccacggccacgccgcgctgctggcctccgagctgttc
tacccggagcacatgatgccctacgtggcaccgccacctcccctgcagggcacataccca
gcgcctcgcgccatgagcgccggtggggcccggcgcgtctacaagaggatgcccagcatc
gagtccgacgtctag
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