Alosa sapidissima (American shad): 121718807
Help
Entry
121718807 CDS
T11137
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121718807 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121718807 (smg7)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121718807 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
121718807 (smg7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Ion_trans_N
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
121718807
NCBI-ProteinID:
XP_041959993
LinkDB
All DBs
Position
1:14112476..14239704
Genome browser
AA seq
1237 aa
AA seq
DB search
MTENPNARFTFWQCLTLPEINKTTINVYGSTAALEIAIKRAREEIALVIHPYSLFRQAEA
LKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQS
QAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQS
ITSSIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAI
LASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWSVSDFIKAFI
KFHGHVYLSKSLDKLNTLREKLEEQFQRLILQKAFSSQQLVHITVINLFELHHLRDFTNE
ADEQSYSSDEQISWFQLLGLFMSFLGVMCSRVLLNKSREEIMGECPLPAIKVSLDWLKLR
PTVFTESVVDKRQYIWPWLVSILNSFQLKEDELSCVSATPLPEEFELQGFLALRPALRTL
DFSKGHQGIAVGKDGLVVRSRHQRLISLGKWVADNQPGLIQYSVSDDLLLFITDIPEDVI
EEPQEKDTPVLQESSNGEQISQEGSLGLRSVLSAGKSQNSTLDSSDRPVVTFKENIKPRE
QSREQGPGQGQGRGQHQRDGGGKERPGYAKGNGATGKNEQKKEGKRKSEVKKNSHDKTPD
AGKQVLNSQVKTQAEVRKTPVSEARKTPVTQSQTSGSSQFIPIHHPGAFPPLPSRAGFPP
PPYVIPPPVAFSMSPGFTFPTNVSVPAPFLQPATHAQTASQVQSGKPSHIPYSQQRPSGP
GAMSQGPPQAPQTQPPPQQPSQQALQQQSVQLQVQQQQQQQQSPTKQAAQLGKSPPHHHG
MQQYMSVAEQTGQMWSQAPAQPQGPMPKMPMQMPVKQPPPSSFFMPPQDPLKLFEHSMSP
SVPMQPPNAVMDKKPKFPEVKVQQDFYWESLYRSGMGERMTKRQPGMFCPDQENVPRGPP
YEDNKSSPLLPPDLLKTLADFEEEEELVFAKPPGFYQAVAGPLSSAPGRNMFLPNQSRME
SAEVMGQSSSLLTRAGFPIQENSYQNNSIFSEAYGKHPHPPTPKPDVPIMHQEHSLYSLF
EGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHSHPSLPFSNFGPIGTPDSRDRR
VTDRWKAEKTGVSGFGLDYLPTSSPSAPETSWHQGGPTSSWATQDMPMEDSSTNLLDSLK
SIWSSSMMQPGPSALEQLLMQQKQKQQRGHGPMNPPH
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaaccctaacgctagatttactttttggcaatgtcttacactgcctgaaata
aacaagaccacaattaacgtctatggcagcaccgcagccttagagatagcaataaagagg
gctcgtgaagaaatagcattagttatacacccttacagtctattcagacaggcagaagcc
ctgaaggctgacatgaccgattcaaagcttggtgctgccgaggtctggacgtcacgacag
gcgcttcaggatttgtaccagaaaatgctggtgacggacctggagtatgcgctggataaa
aaagtggaacaagacctctggaaccatgcttttaagaaccagataactacactccagagt
caagccaagaacagagccaaccccaatcggagtgaagtgcaagcaaacctctcgctgttt
cttgaggcagccagtggattctacacacagttgttacaagaactctgcacagttttcaat
gtggacttgccatgtcgtgtgaaatcatctcagctgggtatcatcagcaataaacagagc
atcaccagcagcatagtgaagccccaacccagctcctgctcctacatctgtcagcactgt
cttgttcatcttggagacattgcacgctaccgcaatcaaaccagccaggcagaatcctac
tacagacatgcagcccagctcgttccttcaaatggccagccctacaatcaactcgcaatc
ctggcctcctccaaaggagaccacctcaccaccatattctactactgccgtagcatcgct
gtgaagttccctttccctgcagcgtccaccaacctgcagaaagcgctctccaaagctctc
gagagtcgtgatgaggtgaagaccaagtggagcgtctccgatttcattaaggctttcatc
aagttccacggtcatgtgtaccttagcaagagtctggacaagctgaacaccctgagggag
aagctggaggagcagtttcagagattgattctccagaaagcgttcagctcccagcagctg
gtccacatcacggtgattaacctgtttgagctgcaccacctgcgggacttcaccaacgag
gcggacgagcagagctacagctcagacgagcagatcagctggttccagctcctgggcctc
ttcatgtctttcctcggagtgatgtgcagccgcgtgttactcaacaagagcagagaggag
atcatgggcgagtgtcctctgccggccatcaaagtgtccttggactggctcaagctgcgg
cccactgtcttcacagagagtgttgtggacaagaggcagtacatctggccgtggcttgtg
tctattctcaacagcttccagctcaaggaagatgagttgtcctgtgtatcagccacccct
ctccctgaagagttcgagctgcaaggctttttggccctccgtcctgccttacggacactg
gacttctccaaagggcatcagggcattgcagtcgggaaggatgggcttgtggtgcgctct
cgccatcagcgcctcatcagcctgggcaagtgggtggcagacaaccagcctgggcttatc
cagtacagtgtgagcgatgacctgctgctcttcatcaccgacatcccagaggacgtgatc
gaagagccccaggagaaggacacgcccgtcctccaggagtcgtcaaacggcgagcagata
tcccaagagggctctctgggcctccggtcggtcctgtcggccgggaagagccagaacagc
acgctggacagcagcgacaggcctgtggtcaccttcaaggagaacatcaagccccgcgag
cagagccgcgagcagggcccgggccagggccagggccgcggccagcaccagagggacggc
ggcggcaaagagcgccccggctacgccaagggcaacggcgccaccggcaagaacgagcag
aagaaggaaggcaagcggaagagcgaggtgaagaagaacagccacgacaaaacccccgat
gctgggaaacaggtactcaacagccaggtgaagacacaggctgaagtgaggaagactccg
gtgtccgaggcgaggaagactcccgtcacccagagccagaccagcggctcctctcagttc
atccccatccatcacccaggggccttcccaccgctgcccagccgagcaggtttccctccc
cctccatacgtcattcctccacccgtggccttctccatgagccccggcttcactttcccc
accaacgtctctgtgcctgcgcctttcctccagcctgccactcatgcccagaccgccagc
caggtgcagtctgggaaaccctcgcacattccctacagccagcagaggccctcgggcccc
ggggccatgagccaggggccgccccaggctccgcagacccagccgcctccacagcagcct
tcccagcaggccttgcagcagcagtccgtgcagctccaggtgcagcagcaacagcagcag
cagcagtcgcccaccaagcaggctgcccagctgggcaagagcccaccgcaccaccacggc
atgcagcagtacatgtcggtggcagagcagaccgggcagatgtggagccaggcgccggcg
cagcctcagggccccatgcccaagatgcccatgcagatgccggtcaagcagccgccgcca
tcatccttcttcatgccgccccaggacccgctcaagctctttgagcactccatgtccccc
agcgtccccatgcagccgcccaacgccgtcatggacaagaagcccaagttccccgaggtc
aaggtgcagcaggacttctactgggagtccctgtaccgctcgggcatgggcgaacgcatg
accaagcgccagccggggatgttctgccccgaccaggagaacgtccccaggggcccgccg
tatgaggacaacaagagctcccctcttcttcctcccgacctgctaaaaacactggcggac
tttgaggaggaggaggagctggtctttgctaagcctcctggcttctaccaggccgtggct
ggccctcttagctctgctcctgggagaaacatgtttttgccaaatcagtctaggatggag
agtgctgaggtgatgggtcaatcctcttcactgctaactcgcgctgggtttcccatccag
gagaactcctatcagaacaacagcattttcagcgaggcctatgggaagcacccacaccca
cccacacccaaacctgacgttcccataatgcaccaggagcactcgctctattccctgttt
gaaggaactccctggtccccctccctgcctgccagctctgaccactcaacgcctgccagc
cagtccccccactcctccaaccccagcagcctgccttcctccccacccacacacagccac
ccctcgctgcccttctccaactttgggccaatcggcacgcccgacagccgagaccggaga
gtcaccgaccgctggaaggcagagaagacgggcgtgagtggcttcgggctggactacctg
cccacgtcctcgccctcggcccctgagaccagctggcaccagggcggccctacaagcagc
tgggccacccaagacatgcccatggaggactcctccaccaacctgctggacagcctcaag
tccatctggtcgagctccatgatgcagcccgggccgtctgcgctggagcagctgctgatg
cagcagaagcagaagcagcagcgcggccacggccccatgaacccaccgcactga
DBGET
integrated database retrieval system
