Alosa sapidissima (American shad): 121718822
Help
Entry
121718822 CDS
T11137
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04382
Cornified envelope formation
asad04510
Focal adhesion
asad04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121718822 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121718822 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121718822 (lamc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
TACC_C
Dynactin_p22
SlyX
Motif
Other DBs
NCBI-GeneID:
121718822
NCBI-ProteinID:
XP_041960053
LinkDB
All DBs
Position
1:14084667..14097045
Genome browser
AA seq
1118 aa
AA seq
DB search
MRSVGIFLCMVFISFPVHGTYRHGKNSCQCNGKALYCVMDAGGLRCVKCTGNTEGRHCES
CKEGFYHQAAGKSCISCNCSPTGSLGPRCDSEGRCSCKAGFTGEKCDRTPLNLKCRGQTN
SQDCLPCFCNGHSSDCSKAAGYSVHNITSSFQKDDEGWHVATAQGVTPPSVHFRWSHTHG
DLEAISKDILPIYFYAPSSYLGNQILSYGQTLSFSLRLDRGTRRPSVSDVVLQGAGLQVS
ASLGDLRTVVACAKKISYTFRLDEKPGSKWQPELSSLQFQKLLSNLTAIMIRGTFGENGR
GYLDNVSLVSARKGTGTPADWVEKCSCPTGYEGQFCERCAPGFKRHSSDSSPLGSCVPCA
CQAGTCDPETGECYSSDDDSLGQSCPTGSYNNPQRPNTCLPCSCPGGSGCSVMSGTLQVK
CDRCPLGTSGSRCHVCANGFYGDPLGERGIVRPCQPCQCNGHVDLRLVGSCHSTTGECLR
CQNKTSGPSCENCLPGFYHSNPRDACKACACDPMGSFAQDCSDAGQCDCRPGYEGLRCHQ
SSCPSCFDPLKSKIDNYAGKVREIEALFNEIASGKVPVNDAQMERSVRALEDVVADMQRK
ADKLSEMERSLEVRLNKVSGTQLGEDRDIQSLAETMDNIKLQEQQYKRQVSAIQQLVQSA
KLKLQQAKQELRQAEFPSGDAAVGSDSLTGLVQKATTLAEKHQGRADFIEKTANSALSDA
EKALNLMRTAMTGENKVKEQIVNLKALYEKKGSEVKAMQNEASGLITTATGESDIAANTL
KQISSLVLPQPPTEDMATLVGSLNSLKKWMEGNLTAYQELQKDVDADQSEAGSLLAQAKA
AQQKYDKLLGRADAAKAVADLALKGINDNMSGVEDALETLRGFDDKISENKALAEDAISK
LPGINGTIRNAVTTNAQTMSVLDSVDTPYNGALGTISTLGEIVTRLEGMPDVVTLSTELE
RNAGVLRGDVDGLQDRADDVLNTIKEETKIAEAQKDTVIQVAEDATTALGNAEGTRTAVG
ETLKTVTDLLNAFGSTSGPVDLNKVNELQAAVNTATTRVAGELLPRLKELEDIDARQKTA
LSNLSANIDAIMADIENLEDIRARIPNGCFNAPPIERP
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgttgggatatttctctgcatggtattcatctccttccctgtccatggaact
tatcgacacggcaaaaatagctgccagtgcaatgggaaggcgctgtactgtgtcatggat
gccggggggctgcgctgtgtgaagtgcacagggaacaccgaggggcggcactgtgagagc
tgcaaggagggcttctaccaccaggcggcaggcaagagctgcatctcctgcaactgcagc
cctacaggttcactgggtccacggtgtgacagcgagggccgctgtagctgcaaagcgggc
tttacgggggagaagtgtgaccgcacgcctctgaatttaaaatgtaggggacagactaac
agtcaggactgcttgccttgcttctgtaatggacactcaagtgactgttctaaagcagct
ggttattctgtccataacatcacctcatcatttcaaaaagatgatgagggatggcatgtc
gctactgcccagggtgtaaccccaccgagtgttcatttccgctggtcacatactcacgga
gacctagaggccatctccaaggacatcttacccatctatttctatgccccatcctcatac
ctgggcaatcagatcctcagctatggccagaccctgtctttctccctccgcctggacaga
gggacccgccgtccctccgtgtccgatgtggtgctgcagggggcgggacttcaagtgtct
gcctctctgggtgatctgaggacggtggtggcctgtgccaaaaaaatctcctacactttc
agactggatgagaagcctggcagcaaatggcagcctgaactgtcatccctccagttccag
aaactcttgagcaacttaactgccatcatgatcagggggacgtttggggaaaatggacgt
ggttatttggacaatgtgagccttgtgtctgctcgtaagggcactggcacccccgcagac
tgggttgagaagtgcagctgccccacagggtatgaaggccaattctgtgagcgctgtgcc
ccagggttcaagagacattcctctgacagcagcccactcggctcttgtgtgccctgtgcc
tgccaggcaggaacctgcgacccagagactggagagtgttactcatctgatgacgattcc
cttgggcagtcctgcccgactggctcctacaacaacccacagaggcccaatacctgccta
ccatgctcttgtcctggtggcagcgggtgctcggtgatgtctgggacactgcaagtgaag
tgtgaccgctgcccactggggacctcaggttctcgttgccatgtctgtgctaatggtttt
tatggtgatccccttggcgagagaggcattgtgagaccatgccagccctgccagtgtaat
ggccacgtggacctccgcttggtggggagctgtcacagcaccacaggggagtgtttgagg
tgccagaacaaaaccagcggcccctcctgcgaaaactgcctgccaggcttctaccacagc
aaccccagagatgcgtgcaaagcctgtgcctgtgatcccatgggctccttcgctcaggac
tgtagcgatgccggccagtgtgactgcaggcccggttatgaaggcctcaggtgccatcaa
tcctcatgcccatcctgctttgacccgctcaagagcaagatagataactatgctggtaag
gtccgtgagattgaggccctgttcaatgagattgcaagcggcaaggtgcctgtgaatgat
gctcagatggagagaagcgtccgtgcattagaggacgtggtggcagacatgcagaggaaa
gcagataaactctcagagatggagaggagtcttgaggtgaggctaaataaagtcagtggg
acccagctgggagaggacagagatattcagtctttggctgaaaccatggacaacatcaaa
ctacaggagcagcagtacaagagacaagtttctgccattcagcaactagttcagagtgca
aagctaaaactacagcaagccaaacaggagcttaggcaagcagagttcccctcaggtgat
gctgctgtgggttcagactctttgactggattagtccagaaggccactacgctggcagag
aagcaccaggggagagcagatttcattgaaaagactgccaacagtgccctgtctgatgca
gagaaagccttgaacctgatgcgaaccgctatgacaggagagaacaaagtgaaggaacag
attgtcaacctcaaggctctatatgagaagaagggctctgaggtgaaggctatgcagaac
gaggcgtccggcctgattactacggcgacaggggagagcgacattgcagccaacactctg
aagcagatctcctctctggtgctcccacagcctcccacggaggacatggctacgctggta
ggcagtctaaacagcctgaagaagtggatggaggggaacctgaccgcataccaggagctg
cagaaggatgttgatgctgaccagagcgaagctgggagcctcttggcccaggccaaggcc
gcccagcagaaatatgacaagttgcttgggagggcagatgctgccaaagctgtggccgac
ctggctctgaaaggcatcaacgacaacatgagtggagtggaggacgccctggagacgcta
cgaggctttgatgacaaaatcagtgagaacaaagcactggcagaggacgccatctctaag
ctgcctggtatcaatggcaccatcagaaacgcagttaccactaatgcccagacaatgtca
gtcctggacagtgtggacacaccgtacaatggagccttgggtaccatcagcacactgggg
gaaatagtgacccgtctggagggaatgcctgatgtggtcactctgtccacggagctggag
aggaacgctggtgtcctcagaggggatgtggacggccttcaggaccgggcggacgatgtg
ctgaacacaatcaaagaggagacaaaaatagcagaggcccagaaggacacagtgatacag
gttgcagaagatgccacaactgccttaggcaatgcagagggcaccagaactgctgttggg
gagacgctcaagacggtcactgaccttctaaatgcttttggctccacaagtggacctgtg
gatctgaacaaggtgaatgagctccaggcagccgtcaacactgctaccacccgtgtggcc
ggggagcttctgccccggctgaaggagctggaggacattgatgcgcggcagaagaccgcc
ctctcaaacttgagcgcaaacattgacgccatcatggccgacatcgagaacctggaggac
atccgtgccaggatccccaatggctgcttcaacgcgccgcccatcgagaggccctga
DBGET
integrated database retrieval system
