Alosa sapidissima (American shad): 121719127
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Entry
121719127 CDS
T11137
Name
(RefSeq) transcription factor AP-4-like
KO
K09108
transcription factor AP-4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121719127
Transcription factors [BR:
asad03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121719127
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GFIT
Motif
Pfam:
HLH
COE1_HLH
DUF5611
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121719127
NCBI-ProteinID:
XP_041960467
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Position
9:5551087..5559387
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AA seq
334 aa
AA seq
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MKNMEYFMVPAEKVSLQQFRKSEKEVIGGLCSLANIPLTPESARDQERRIRREIANSNER
RRMQSINAGFQSLKTLIPHSDGEKLSKAAILQQTAEYIIALEQEKTQLLQQNNQLKRFIQ
EFTGSSPKRRRTEEKDEGIGSPDILEEEKLEDLRRELLELRQHLEKERSARAQLEEQLRS
LDTQLYPEKLAAVAQQQVQDQHSLLHTQTLLRLQQLQQQQPPPDRDSAPRSPQVMATPTP
PAPTHHPTVIVPAPTHFATATVSPNPSSNIMSTSRQNLDTIVQAIQHIEGTQRVGGVEEE
QRRAVIVTPRRVSMETTGSDTASDSEGEGNCPMT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatggagtatttcatggtaccagctgagaaggtgtctttgcaacaatttagg
aaatcggagaaagaagtcatcgggggtctttgtagtctggccaatattccattgacaccg
gagtcagcgcgcgaccaggaacgtcgcattcgcagggaaattgccaacagcaacgaaagg
cgccgaatgcagagcatcaacgctggctttcagtctctgaagacactcatcccacatagt
gacggggagaagctaagcaaggctgccatacttcagcagactgccgagtacatcatcgct
ctggagcaggagaagactcagctcctacagcagaacaaccagctcaagcgcttcatccag
gagttcaccggctcctcgccgaagaggaggcgcacggaggagaaggatgaaggcatcggc
tccccggacatcctggaggaggagaagctggaggacctgcggcgagagctgctggagctg
cgtcagcatctggagaaggagcgctccgcccgcgcacagctggaggagcagctgcgctcc
ctggacacccagctgtacccggagaagctggcggcggtggcccagcagcaggtgcaggac
cagcactcgctcctccacacacagaccctgctgcgccttcagcagctgcagcagcagcag
ccgccgcccgacagagacagcgccccccgcagcccacaggtgatggccactcccaccccc
cctgcccctacccaccatcctactgtcatagtccccgcccctacacactttgccacggcg
accgtcagtccaaaccccagcagcaacatcatgtccacatcacggcaaaaccttgacact
attgttcaggccatccagcatattgaggggacccagagagtgggcggagtcgaggaggag
cagcggcgggcagtcatcgtcaccccgcgccgcgtctctatggaaaccacgggctcggac
acggcctctgacagcgagggtgaaggcaactgccccatgacctaa
DBGET
integrated database retrieval system
