Alosa sapidissima (American shad): 121719130
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Entry
121719130 CDS
T11137
Symbol
jupa
Name
(RefSeq) LOW QUALITY PROTEIN: junction plakoglobin a
KO
K10056
junction plakoglobin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04382
Cornified envelope formation
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121719130 (jupa)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121719130 (jupa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121719130 (jupa)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121719130 (jupa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
Adaptin_N
HEAT_2
KAP
ARMC9_ARM
Atx10homo_assoc
HEAT_EZ
BORCS7
Motif
Other DBs
NCBI-GeneID:
121719130
NCBI-ProteinID:
XP_041960468
LinkDB
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Position
9:10695385..10720732
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AA seq
729 aa
AA seq
DB search
MAMQMGEPEGMVKVSEWQQTYYSSDSGIQSGATTVRTDDDGGEYSKQYTITTTVTTDKPA
ELESQLNMTRAQRVRAAMFPETVAEGTTILSTQTEGTHMTNVQRLAEPSQLLKAAIVHLI
NYQDDAELASRAIPELTKLLNDDDQAVVGKAAQIVNQLTRKEASRRALMQSPQMVAAVVR
AMQNTSDMETARATASILHNLSHQREGLLAIFKSGGIPALVRMLSSPMESVLFYAITTLH
NLLLHQEGAKMAVRLADGLQRMVPLLKKSNPKFLAITTDCLQLLSYGNQESKLIILANSG
PEGLVHIMRNYNYEKLLWTTSRVLKVLSVCPSNKPAIVDAGGMQALGKHLTGSSQRLMQN
CLWTLRNLSDAATKQEGLDSLLMDLVGLLSSDDMHMLTCATGVLSNLTCNNGRNKSLVVQ
GNGVEALIHAILRASEKEDVVEPAVCALRHLTSRHPDAELAQNAVRQHYGIPAIVKLLAQ
PFYWPIIKAAVGLVRNLALCPANQAPLRDAGAIQRLINLLLKAHQDAQKHGSTAQQTYQD
GVRMEEIVEGCTGALHILARDPTNAADIASMDTIPLFVQLLYSPVDNVKRVAAGVLCELA
VDKRSAEVIDAEGASAPLMELLHSSNEGIATYAAAVLFRISEDKTADYRKRVSVELTHSL
FKHDPAAWDMAHKNAQMDTAYAADEVDAGYGGYGGYPEGMPMNGMHMEGEMPEDYAPSMG
YGAYTDQPY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcagatgggcgagcccgagggcatggtgaaggtgtcggagtggcagcagacc
tactactcgtctgactcgggcatccagtccggcgccaccacagtgcgcacagacgacgat
gggggcgagtacagcaagcagtacaccatcaccaccacagtcaccactgacaaaccagca
gagctggagtctcagttaaacatgacgcgggctcagcgcgtgcgggcggccatgttcccc
gagacggtggcggagggcacgaccatcctgtccacacagactgagggcacccacatgacc
aacgtgcagaggctggctgagccctcccagctgctcaaggccgccatcgtccacctcatc
aactaccaggacgacgcagagctagcttcgcgtgccatacccgagctcaccaagctcctc
aacgacgatgaccaggcggtggtgggtaaggcggcccagatcgtgaaccagctgacgcgc
aaggaggcgtctcggcgggcgctcatgcagtcgccccagatggtggcagcggtggtgcgc
gccatgcagaacaccagcgacatggagacggcccgcgccacggccagcatcctgcacaac
ctgtcgcaccagcgcgagggcctgctcgccatcttcaagtccggcggcatccccgcgctc
gtccgcatgctcagctcccccatggagtcggtgctgttctatgccatcactacgctgcac
aacctgctgctgcaccaggagggggccaagatggccgtgcgtctggccgacgggctgcag
aggatggtgccgctgctcaagaagagcaaccccaagttcctggccatcaccaccgactgc
ctgcagctcctctcctacggcaaccaggagagcaagctgatcatcctggctaacagcggc
cctgagggtctggtccacatcatgaggaactacaactatgagaagctcctgtggaccacc
agccgcgtgctcaaagtgctctccgtctgccccagcaacaagcccgccatcgtcgacgct
gggggcatgcaggccctgggtaagcacctgacgggctccagccagaggctgatgcagaac
tgcctgtggacgctcagaaacctgtctgacgccgccaccaagcaggagggtctggacagt
ctcctgatggacctggtcggtctgctctcgtccgacgacatgcacatgctgacgtgcgcc
accggcgtgctgtccaacctcacgtgcaacaacgggcgcaacaagtccctggtggtgcag
ggcaacggcgtggaggcgctgatccacgccatcctgcgcgccagcgagaaggaggacgtg
gtggagccggccgtctgcgccctgcgccacctcaccagccgccacccggacgccgagctg
gcccagaatgccgtgcggcagcactacggcatccccgccatcgtcaagctgctcgctcag
cccttctactggcccatcatcaaggctgcagttggtctggtccgtaacctggctctgtgc
ccagccaatcaggcgcctctcagggacgcaggggccatccagagactgatcaacctgctg
ctgaaggcccatcaggacgcccagaagcacggctccactgcccagcagacgtaccaggat
ggtgtgaggatggaggagattgtggagggctgcacaggagctctgcacatcctggccaga
gacccgaccaacgctgccgatatcgcgtccatggacaccatccccctgtttgtccagctg
ctgtactccccagtggataacgtgaagcgcgtggctgccggcgtgctatgtgagctggct
gtggacaagcgctcggccgaggtgatcgacgccgagggagcctccgcccctcttatggag
ctcctgcactccagcaacgagggaatcgccacctacgccgccgccgtcctcttccgcatc
tccgaggacaagactgccgactacaggaagcgcgtgtccgtggagctgacgcactcgctc
ttcaaacacgaccccgctgcatgggacatggcacacaagaatgcacagatggacactgcc
tacgcagctgacgaggtggacgctggatacggcggctatggcggctatcctgagggtatg
cccatgaatggcatgcacatggagggcgagatgcccgaggattatgccccaagcatgggc
tatggcgcctacacagatcagccctactaa
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