Alosa sapidissima (American shad): 121719137
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Entry
121719137 CDS
T11137
Symbol
bcl11ab
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11A b
KO
K22045
B-cell lymphoma/leukemia 11A
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121719137 (bcl11ab)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121719137 (bcl11ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
CCHC_BCL-11A
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-H2C2_5
zf-C2H2_15
Protamine-3
zf-C2H2_ATbp_2nd
DNA_pol_phi
SWAP1_C
Ccdc27
Motif
Other DBs
NCBI-GeneID:
121719137
NCBI-ProteinID:
XP_041960484
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Position
9
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AA seq
859 aa
AA seq
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MSRRKQGKPQHLSKREFSPEPVTADRPEEPQDDARLLPAAASALPKGEPDLLTCGQCHTR
FPLSDILLFIEHKRRQCHGRLCPDKDLNNRPRSPLSSSSSLPTTPSCLAPRAIVTPGRRG
RHPVEVAVQVTPHDHRDNLSMASPGICPKQEHTTEKDEPSIYTCTTCKQPFGSAWFLLQH
AQNTHGFRIYLESEPGSPLTPRVASAPGMGGECGSQAPPLHTAHLADGSPYGAMRLPGSS
SSGRDPVVVVASGPREGRYPRTPPLFSPPPRHHLSPDDLALAPQHPSAYDRVMRLNSVPL
DSPVMDFSRRLRELAGQSALAGSSPPMSPGRPSPMQRLLQPFQPSAAPGAASSANTTPSP
SGARLSAQQQQAQQAPGTPTRSKSCEFCGKSFKFQSNLIVHRRSHTGEKPYKCHLCNHAC
TQASKLKRHMKTHRHNSSSSLTSRSDDGLSASSSPEPGTSDVPGSATSALKSVVAKFKSE
NNGVIPENGEEEEEEEEEEEEEEEEEEEEEEGEEEEEEIEGEEEEEEEEVENGPEDKKDF
ARFSLSLEGARHHENNRSRYHGDLNSHKRRALNSSSQVTTPDLGDEGDSASELDRAEDSH
CGVMVNGTDLSRKLLVSSPNSLSPLSKRIKVEKVEKDLDSPTPPTAGSVPPMSENVYSQW
LAGYAASRQLKEPSSMFLAMGDSRQSPFGTSSEHSSSENGSLRYSTPPGDLDGIGGVGGG
GASGQRSGAGSGASTPHLTVPPVRPSSKDSSGGGSGGSSSGSRRSDTCEYCGKVFKNCSN
LTVHRRSHTGERPYKCELCSYACAQSSKLTRHMKTHGQMGKDVYKCEICHMPFSVYSTLE
KHMKKWHGERPLSEDIKSE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgcaagcagggcaaaccccagcacttaagcaagcgggagttttcgcccgag
cctgtgacagccgaccgtcctgaggagccccaggatgatgcccgcctgctcccggcggcc
gcctccgcgctgcccaagggcgagccggacctcctcacatgtgggcagtgccacacccgc
ttccccctgtccgacatcctgctgttcatcgagcacaagcgcaggcagtgccacggccgc
ctctgcccggacaaggacctcaacaacaggccccgttcgccgttgtcgtcgtcgtcgtcg
ttgccgaccaccccctcgtgcctggcgcctcgtgccattgtcacccccgggcgtcgcgga
cgccacccggtcgaggtggccgtccaggtgacgccacatgaccacagggataacttatcc
atggcctcccctggaatatgtcccaagcaggagcatacaacagaaaaagacgagcccagc
atctacacttgcacaacctgtaagcagcccttcggcagtgcctggttcctgctccagcac
gcccagaacacgcacggcttccgcatctacctggagagcgagccgggcagcccgctgacc
ccgcgcgtggcctccgcccccgggatgggtggcgagtgcggctcccaggcgccccctctc
cacacggcccacctggccgacggcagcccctacggcgccatgcggctccccgggtccagc
tcgtcggggagggacccggttgtggtggtggcgtccggcccccgtgagggccgctacccc
cggacgcccccactcttcagcccgccgccgcggcaccacctgagcccggatgacctggcc
ctggctccccagcacccgagcgcctacgaccgggtcatgcgcctcaattcggtgcccctg
gactcgccggtcatggacttctcgcggaggctccgggagctggcgggccagtcggcgctg
gccggctcctcgccccccatgtcccccgggcggcccagccccatgcagcggctcctgcag
cccttccagccctcggccgctccgggcgccgcctcgtccgccaacaccacgccgtctccg
tccggcgcccgcctctcggcccagcagcagcaggcccagcaggcgccgggcaccccgaca
cgctccaagtcctgcgagttctgcggcaagagcttcaagttccagagcaacctcatcgtg
caccgacggagtcacacgggcgagaagccctacaagtgccacctgtgcaaccacgcctgc
acgcaggccagcaagctcaagcgccacatgaagactcaccggcacaactcctcgtcctcg
ctgacgtccaggtccgacgacgggctctcggcgtccagctcacccgagccgggcaccagc
gatgtgccgggcagtgccactagcgccctcaagtcggtggtggccaagttcaagagcgag
aataacggggtgatccctgagaatggagaagaggaggaggaagaggaggaggaggaagag
gaagaagaagaggaggaggaggaggaggaggaaggggaagaggaagaggaggaaatagag
ggagaggaggaagaggaggaagaagaggtggagaacgggcccgaggataagaaggacttt
gcccgcttcagtctgagcctcgagggcgcccgacaccatgagaacaaccgcagccgttac
catggagacctgaattcgcacaaacggcgagcactcaactcctccagccaggtgaccacg
cctgaccttggcgacgagggcgactctgcgtcagagctggaccgcgctgaagacagccac
tgcggggtcatggtgaatggcaccgacctctccaggaagctcctggtctccagccccaac
tccctcagccccctgtccaagcgcatcaaggtggagaaggtagagaaggacctggactcc
ccgactcccccgacggccggctccgtgccgcccatgtcagagaacgtctactcccagtgg
ctggccggctacgccgcctcgcggcagctcaaggagcccagctccatgttcctcgccatg
ggggactcgcgacaatcgcccttcggcacgtcctccgaacactcctcctcggagaacggc
agcctgcgctactccacgccgcctggcgatctggacgggatcggcggcgttggcggcggc
ggcgcatcgggccagcgcagcggtgccgggagtggcgccagcacccctcacctgaccgtc
ccgcccgtgcggcccagctccaaggacagcagcggcggcggcagtggcgggagcagcagc
ggaagtcgccggagcgacacctgcgagtactgcggcaaggtgttcaagaactgcagcaac
ctgacggtgcaccggcgcagccacaccggcgagcggccgtacaagtgcgagctgtgcagc
tacgcctgcgcccagagcagcaagctcacgcgccacatgaagacgcacggacagatgggc
aaggacgtgtacaagtgcgagatctgccacatgcccttcagcgtctacagcaccctggag
aagcacatgaagaagtggcacggagagcggccactcagcgaagacattaagtccgagtaa
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