Alosa sapidissima (American shad): 121719174
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Entry
121719174 CDS
T11137
Name
(RefSeq) transcription factor LBX1b-like
KO
K09353
homeobox protein LBX
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121719174
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121719174
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Ortholog
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
121719174
NCBI-ProteinID:
XP_041960543
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Position
9:complement(11867664..11893366)
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AA seq
253 aa
AA seq
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MSREIATEKESHSPLDHLPPPASSNKPLTPFSIVDILSKPSVKRGTALIFADDKHAGPPG
LGLLHLPKRTLVTKAPLCALEELASKTFRGLEVGVLRSVEGKDCLTLYTQQHNPKKRRKS
RTAFTTNQIYALEKRFLFQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLKRDLEELK
ADVKSATVIGSVPLEKLDKLADLERLVNGTAGHRSPDTQSEKQFRMPPTSPRSDHTACKE
SSDDEGEEIDVDD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagaaattgcaacagaaaaagagagccattctccgttggaccatcttccaccg
cccgcatcctctaacaagccgcttacgccgttcagcatagtggacatactcagcaaaccc
tcagtaaaacgagggacagcacttatctttgcggacgacaaacatgcaggtccacctggc
ctaggcctactgcacctgcccaaacgaacacttgtcaccaaagctccactgtgcgctctc
gaagaacttgccagcaaaacctttagggggcttgaagtgggtgttctccgatccgtagaa
ggaaaggattgtttgacactatatacccaacagcataaccccaagaagcgcagaaagtcc
aggaccgcatttactacaaatcaaatctacgccctggagaagagatttttgttccaaaaa
tatttgtctccagcggacagagaccagatcgcgcatcaactgggtctaacgaacgctcaa
gtcatcacgtggtttcaaaaccgaagggccaagttaaagcgggacttggaggagctgaag
gcagacgtaaagtcggccacagttattgggagtgtgccgttggaaaaactggacaaactg
gccgatttggagagactggtcaatgggaccgcggggcaccgttcaccagacactcagtcg
gaaaagcagtttcggatgccccccacgtctccacgttcagaccacacagcttgtaaagaa
agctcagacgatgagggcgaggagattgacgtagatgactga
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