Alosa sapidissima (American shad): 121719351
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Entry
121719351 CDS
T11137
Symbol
pex6
Name
(RefSeq) peroxisome assembly factor 2 isoform X1
KO
K13339
peroxin-6
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121719351 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121719351 (pex6)
Membrane trafficking [BR:
asad04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
121719351 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
AAA_33
Mg_chelatase
Rad17
RuvB_N
RNA_helicase
NPHP3_N
nSTAND3
DUF815
AAA_14
AAA_7
TsaE
Vps4_C
Parvo_NS1
TIP49
AAA_17
AAA_25
AAA_28
IstB_IS21
AAA_24
PEX6_4th
PhoH
Motif
Other DBs
NCBI-GeneID:
121719351
NCBI-ProteinID:
XP_041960772
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Position
9:1455383..1467329
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AA seq
1088 aa
AA seq
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MAAPVRLVFPETFPSHIPALHVLINRQEFNNFFPGCKDSSLTLLYSYCKSKLGILLCACF
VSDEETPWCESPVVLHNGNKLALRVFASKLFYKHHGLSKASKGVVRLFQPLVLSKVVVGA
RSRQSFKWATSDKFSNGLHVLAACQDQALLARQGDPLSLPFHSLVFDTTQGRHLSDLVVL
ESSPVTQGVITVNTSLVVTDCRDISPYQTLNEQLNHNSTRNLMSLIASDFAHYANSLGSG
NSLLDNTALVGSGFSGFVQALECRVEIRVVDILNLCQKGEIIFREGQHAGLDMDNTIFLS
KNLLLKLGLFNGEWVVVSTLCAPSERTKASVNLEPTQSPENSENKRASKARLDKHLALVV
VVDFAKSFNTAISDNVGVISLVHWFNLTSGEPLPRGSKTVKIKRWNPLSTLPGHQLSESS
SRSASPPFATELHIEAVRSPGVSLHRLWDALLHQYFSTPRLVWQGAVLSVPTTGHPEVIE
TYYEGITRWPVLCFKVKRACGTADSGPYLADTTHSRLYLEGSTNSPAPWSGSNDASFWTN
VSPAGLSSTVEQLVTIIHPYISESSSAFQGRGTILLKGPNGCGKVTAVQAACRRLHLHLL
KYDCVTLCADTAAACEAKMRSAFQKAELHQPCVLLLRNAQLLGQPRDGTETDARVLAALC
QLIEKVPSRVIVVATVSNTKELSSGMLAVFVHQVVIKRPTEEQRRALLSMLSEGLPLGKN
VNLSKLARQTVGFVLGDLCALLTLAGKVAHKRILKTSWLSCSFPGGLSLQQEEDLCASGV
IVQAEDFSVALDTLQEMHSQALGAPKIPSVRWQDVGGLQQVKKDILDTIQLPLEHPELAA
MGLKRSGLLLYGPPGTGKTLLAKAVATECSLTFLSVKGPELLNMYVGQSEENVREVFASA
RGAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSTGDVFVIGATNRPD
LLDQSLLRPGRFDKLVYVGINDNKDSQLQVLKAITRKFRLEPGVSLAEVVARCPPQMTGA
DLYALCSDAMMAAVKRKIQCISEGLEAEDGELLLSAEDFQQALCNIQPSVSEQELLKYKL
IQQKLNTK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgtcagattagttttccctgagacgtttccatcgcatatacctgctttg
cacgttcttatcaataggcaggagttcaataatttctttccaggttgcaaggactcgtcg
ctgacgttgttgtactcatattgcaagtcaaagctgggtattctgttatgtgcttgtttt
gtatcagatgaagaaacgccgtggtgtgagtcacctgtggtgttgcacaacggtaacaaa
cttgcattaagagtttttgcaagtaaattgttctacaaacaccatggactttcgaaggca
tcaaagggtgtcgtgcgtctctttcaaccactggtgttaagtaaagttgttgtaggcgcg
cgtagtagacaaagtttcaagtgggcgacctccgacaagttctcaaatggcttgcacgtt
cttgcagcttgtcaggaccaggcgcttttggccagacaaggagacccactgtcgttacct
tttcactctctagtctttgataccacgcagggtcgccatctgtctgacttggttgtgcta
gagtccagccctgtgacgcagggagtcattaccgtcaatacaagtttggtggttactgac
tgtcgagacatcagtccatatcagaccttgaatgaacagctgaaccacaattctactcgt
aatttgatgtctttgatcgcttcggactttgcccattatgccaatagcttgggcagtggc
aactctttactggacaatacagcattggttggctctggattctctggttttgtgcaggca
ctggaatgcagggttgagatcagagttgttgatattctcaacctctgccagaaaggtgaa
atcatttttagagaaggacaacatgctgggttggacatggacaacacaatcttcctcagc
aagaatttgctgcttaaacttgggttgtttaatggtgaatgggttgtggtgtctacattg
tgtgcaccctctgaaaggaccaaggcatcagtgaatttagagccaactcaaagtcctgaa
aattcagaaaacaagagagcctctaaagcccgactagataaacaccttgccttggtagtg
gtggtagactttgccaagagtttcaacacagctatcagtgacaatgttggtgttatctcc
ttagttcattggtttaatctgaccagtggagagccacttcctcggggcagcaagactgtg
aaaatcaagagatggaatcccctgtctactcttccaggacatcagctgtcagagagctct
tcccgatcagcctcaccaccatttgccacagagctccacattgaggcagtcagatcacca
ggcgtaagcttacacaggctctgggatgcacttctccaccaatattttagtacaccaagg
ctggtgtggcagggagctgtcttaagtgttcctacaactggacatcctgaggttattgag
acctactatgagggaataacaaggtggccagtcttgtgctttaaagtgaagagagcatgt
ggcacagcagactcaggaccctacctggcggatacaacacactcccgtctgtacttggag
ggcagcactaatagcccagctccatggtctggctcaaatgatgcctcattctggacaaat
gtgtcacctgctgggctgtcaagcactgtagagcaactagtgaccatcattcatccctat
atcagtgagagctcatccgcgttccaaggaaggggcaccatcttgctcaaaggaccaaat
ggttgtggcaaagtcactgctgtccaggcagcatgccggaggttgcacctgcatctgctg
aagtatgattgtgtcacgctctgtgctgacactgcagctgcctgtgaggccaagatgaga
tctgcatttcagaaggcggaactccatcagccatgtgtccttctgctcaggaacgctcag
ctgctagggcaaccacgggatggcacagaaacggatgccagagtgctagctgcactgtgt
cagttaatagagaaggtcccgtccagggtcatagtggtagccactgtgagtaacacaaag
gagctctcctcaggtatgctggcagtgtttgtccaccaggtagtgatcaagcgcccgaca
gaggaacagagacgagccctgctaagcatgctcagtgagggccttcccttgggcaagaat
gtcaacctgagcaagctggctcggcagactgtgggatttgtccttggagacctttgtgcg
ttattgactctggctggaaaagttgcacacaaaaggattctgaaaacaagctggctgtcc
tgtagctttcctggaggactgagtttgcagcaggaggaggacctgtgtgcgtcaggagtg
attgtccaggctgaggacttcagtgtggctctggacactttgcaagagatgcactcgcag
gccctcggggccccaaagatcccctctgtcagatggcaggacgtcgggggccttcagcag
gtgaagaaggacatcctggacaccattcagctccctctggaacaccccgaactggcagcc
atgggcctgaagagatctgggctgctgctgtatggaccacctggtactggcaaaactctg
ctggccaaagcagtggccacagaatgctctttgactttcctgagtgtaaagggacccgag
ttactcaacatgtatgtgggacagagtgaggagaatgtcagagaggtgtttgcttcagcc
cgtggtgcagctccttgcataatattctttgatgagttggactcactggctcccaacaga
ggcagaagtggagactcgggaggtgtgatggacagggttgtgtctcagttgcttgcagag
cttgatggcctccactccactggtgatgtttttgtgattggagcaaccaatcgtccggac
ttgctcgaccagtccctgctcagacctggaagatttgataaactcgtatatgttgggatc
aatgacaacaaggactcacagttgcaagttctaaaggccatcacaagaaagttcagattg
gagcctggagtgagccttgcggaagtggtggcacgttgcccacctcagatgaccggagca
gacctctatgcactctgctctgatgctatgatggctgctgtgaagaggaagattcaatgc
atcagtgaaggcctggaggcagaggacggagagctgttgctctcagcggaggatttccag
caggctttatgcaacatacagccgtccgtgtctgaacaggagctactcaagtacaaactt
atccagcagaagctcaatacaaagtaa
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