Alosa sapidissima (American shad): 121719428
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Entry
121719428 CDS
T11137
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04141
Protein processing in endoplasmic reticulum
asad04210
Apoptosis
asad04217
Necroptosis
asad04218
Cellular senescence
asad04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121719428
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121719428
04217 Necroptosis
121719428
04218 Cellular senescence
121719428
09144 Cellular community - eukaryotes
04510 Focal adhesion
121719428
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121719428
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
121719428
Peptidases and inhibitors [BR:
asad01002
]
Cysteine peptidases
Family C2: calpain family
121719428
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Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Sclerostin
Motif
Other DBs
NCBI-GeneID:
121719428
NCBI-ProteinID:
XP_041960988
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Position
9
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AA seq
733 aa
AA seq
DB search
MSGIASKLQHNRTKAEGFGSNSHAVPYLDQDYEALKRQCLESGTLFEDYMFGATVSSLGF
DELGPDSYKIEGVEWKRPAELTASPQFIVEGATRTDICQGSLGDCWLLAAIASLTLNKEV
LNRVVPHGQSFDHNYAGIFHFQIWQYGEWVDVVIDDRLPVRDGKLLFVHSAEGSEFWSAL
LEKAYAKVNGCYEVLSGGSPTEGFEDFTGGIAERFKLNSPQPNLYSIIQKALDRGSLLGC
SINTTGNEARESVTSQQLVKAHAYSITGAEEVKCSGEIIRLIRVRNPWGKIEWKGPWSDS
SSEWQLISDADRERLRLKAEDGEFWMAFSDFLEQFSVVEVCNLTPDTLTGDQLKKWSLNA
FDGNWRRGSTAGGCRKFPKTFWMNPQFVIRLEEEDDDGEKGCSFLVGLMQKNRKNRLRMG
HGQDMHTIGFTIYEVPEQFTGQRNVHLEKTFFLRHAQKARSETFIDLREVVTRFCMPPGE
YLIIPSTYKPSKDGDFFVRVFSEKHADLQELDDPIEFKVEEEEEISEDEVDGTFKTLFGK
LAGEDSEISAFELKNILNKVVSKRDKGQKHQSRTRFPHSRCCGLLSQMSPCRGSKRSPDI
NTDGFGLETCRNMINLLDKDGNGTLGLVEFKTLWAKIEKYLKIYRQRDEDNSGTMSSTEM
RAAVEEAGFSLNNPLHQILVTRFSNADLTIDFDNFVSCLIRLESMFHIFQTLDTDNSGKV
EFNMFQWLYLTLL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtatcgcgtctaaactgcagcacaaccggaccaaggcggaaggtttcggatcg
aacagccatgctgttccgtacttggatcaggactacgaggcgctgaaacggcagtgcctg
gaaagcggcactctcttcgaagattacatgttcggcgcgaccgtatcctcgctgggcttc
gatgaactcggacctgactcctacaaaattgaaggcgttgagtggaagagaccagcggaa
ctgactgccagtccacagtttatagttgaaggagcaacaagaacagacatctgtcaagga
tctcttggtgactgctggttactggcagctatcgcctctctcactctaaataaagaggtt
ctgaatcgagtggtaccacacggacagagctttgaccacaactatgccggaatatttcac
ttccagatctggcagtatggtgagtgggtggatgttgtcattgacgaccggttgcctgtg
agggatggaaagctgctgtttgtgcactcagcagagggctcagagttctggagtgcccta
ctggagaaggcctatgccaaagtaaacggctgctatgaggtgttgtctggaggctctccc
actgagggctttgaggacttcaccgggggcatcgctgagcgcttcaaactcaactcccca
cagcccaacctctacagcatcatccagaaagccctagacagaggatcgctgctgggctgt
tccatcaacaccactggcaatgaagctcgtgaatcagtgacatcacagcaactagtgaaa
gcacacgcctactcgataacaggagcagaggaggttaaatgctctggtgagatcataaga
ctgattcgtgtgaggaacccctggggcaagattgagtggaaaggcccctggagtgacagt
tcctcagagtggcagctcataagtgatgcagacagagagagactcagactcaaagccgaa
gacggagagttttggatggccttctcagacttcctagagcagttctcggtggtggaggtg
tgtaacctgactccagacacactgacaggggaccagcttaagaagtggtccctcaacgcc
ttcgacggcaactggaggaggggatccactgcgggagggtgcaggaaattccccaagacg
ttctggatgaaccctcagtttgtgatccgactggaggaggaggacgatgacggagagaag
ggttgcagcttcctggtgggactcatgcagaagaaccgaaagaaccggcttaggatgggc
catggccaggacatgcacaccatcggcttcaccatctatgaggttcctgaacagtttact
ggccagaggaatgtccacctggagaagacgtttttcctccggcatgcccagaaggcgcgc
tccgagaccttcatcgacctgcgggaggtggtcacgcgcttctgcatgccgcccggcgag
tacctcatcattccgtccacgtacaagcccagcaaggatggagacttctttgtgcgcgtc
ttctccgagaagcacgccgacttacaggagctggacgaccctatagagtttaaagtggaa
gaggaggaggagatctcagaggacgaagtggacggcacgttcaaaacgctctttgggaag
ctggcgggagaggactctgagatatcagcctttgaactgaagaatattctcaacaaagtc
gtgtccaaacgtgataagggacagaaacaccaaagcaggacgcgattccctcacagcagg
tgttgtggcctgctgtcccagatgtccccttgtcggggtagtaaacgaagccctgatatt
aacacagacggctttggtctggaaacgtgccgcaacatgatcaaccttctggacaaagat
ggcaatgggacacttggtctggtggagtttaagaccttgtgggccaagatagagaaatat
ctgaagatttatcgtcagcgagatgaggacaattctggcaccatgagctcaactgagatg
agagcagctgtagaggaagctggtttctctctgaataatcctctacaccagatcctggtg
acccgtttcagtaatgctgacctcaccattgacttcgacaattttgtgagctgcctgata
cggctggagtccatgttccacatatttcaaactctggacacggataattcaggaaaggtt
gagttcaacatgtttcagtggctgtatttgaccctgctgtga
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